Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 61% ± 30% | |
microglial cell | 16 studies | 67% ± 20% | |
oligodendrocyte | 14 studies | 41% ± 17% | |
oligodendrocyte precursor cell | 14 studies | 62% ± 26% | |
endothelial cell | 13 studies | 33% ± 17% | |
glutamatergic neuron | 12 studies | 83% ± 16% | |
fibroblast | 12 studies | 32% ± 11% | |
GABAergic neuron | 11 studies | 72% ± 21% | |
adipocyte | 10 studies | 49% ± 20% | |
interneuron | 6 studies | 65% ± 28% | |
neuron | 5 studies | 54% ± 19% | |
retina horizontal cell | 5 studies | 59% ± 25% | |
smooth muscle cell | 5 studies | 33% ± 18% | |
granule cell | 4 studies | 69% ± 19% | |
retinal pigment epithelial cell | 4 studies | 56% ± 25% | |
cardiac muscle cell | 4 studies | 37% ± 8% | |
Mueller cell | 4 studies | 67% ± 18% | |
GABAergic interneuron | 3 studies | 62% ± 15% | |
mesothelial cell | 3 studies | 47% ± 26% | |
vein endothelial cell | 3 studies | 39% ± 22% | |
GABAergic amacrine cell | 3 studies | 71% ± 11% | |
amacrine cell | 3 studies | 43% ± 23% | |
connective tissue cell | 3 studies | 34% ± 8% | |
ependymal cell | 3 studies | 39% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2251.28 | 2629 / 2642 | 94% | 6.27 | 661 / 705 |
skin | 94% | 1917.30 | 1693 / 1809 | 85% | 4.23 | 401 / 472 |
breast | 95% | 935.22 | 438 / 459 | 58% | 3.72 | 654 / 1118 |
adrenal gland | 98% | 1377.08 | 254 / 258 | 41% | 1.30 | 95 / 230 |
prostate | 82% | 589.06 | 202 / 245 | 52% | 1.23 | 262 / 502 |
lung | 97% | 1096.50 | 561 / 578 | 32% | 0.81 | 366 / 1155 |
ovary | 100% | 3133.77 | 180 / 180 | 20% | 0.41 | 87 / 430 |
bladder | 100% | 981.90 | 21 / 21 | 13% | 0.38 | 63 / 504 |
spleen | 100% | 2115.16 | 240 / 241 | 0% | 0 | 0 / 0 |
uterus | 78% | 470.75 | 132 / 170 | 20% | 1.13 | 91 / 459 |
adipose | 95% | 981.74 | 1149 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 45% | 270.02 | 644 / 1445 | 32% | 1.25 | 58 / 183 |
thymus | 63% | 348.79 | 412 / 653 | 8% | 0.28 | 46 / 605 |
intestine | 57% | 340.91 | 553 / 966 | 12% | 0.44 | 62 / 527 |
pancreas | 4% | 17.82 | 14 / 328 | 61% | 1.43 | 108 / 178 |
blood vessel | 58% | 387.56 | 772 / 1335 | 0% | 0 | 0 / 0 |
stomach | 27% | 147.12 | 97 / 359 | 21% | 0.85 | 61 / 286 |
heart | 48% | 247.89 | 410 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 33% | 0.71 | 26 / 80 |
liver | 4% | 18.85 | 10 / 226 | 27% | 1.34 | 109 / 406 |
kidney | 8% | 42.75 | 7 / 89 | 22% | 0.55 | 196 / 901 |
muscle | 20% | 88.17 | 157 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.16 | 4 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.04 | 1 / 29 |
peripheral blood | 1% | 2.65 | 5 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0031116 | Biological process | positive regulation of microtubule polymerization |
GO_0030336 | Biological process | negative regulation of cell migration |
GO_0022008 | Biological process | neurogenesis |
GO_0007399 | Biological process | nervous system development |
GO_0032703 | Biological process | negative regulation of interleukin-2 production |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_1990752 | Cellular component | microtubule end |
GO_0005640 | Cellular component | nuclear outer membrane |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | NAV3 |
Protein name | Neuron navigator 3 Neuron navigator 3 (Pore membrane and/or filament-interacting-like protein 1) (Steerin-3) (Unc-53 homolog 3) (unc53H3) NAV3 protein Alternative protein NAV3 |
Synonyms | KIAA0938 STEERIN3 POMFIL1 |
Description | FUNCTION: Plays a role in cell migration . May be involved in neuron regeneration. May regulate IL2 production by T-cells. . |
Accessions | H0YHX7 ENST00000550788.1 ENST00000552895.5 ENST00000644176.1 ENST00000550503.1 ENST00000397909.7 [Q8IVL0-1] H0YI14 ENST00000550042.2 Q6PJB7 ENST00000536525.6 [Q8IVL0-2] H0YHA8 A0A1B0GTC4 L8ECF3 Q8IVL0 F8VZV4 ENST00000549464.5 A0A2R8YFX5 |