MTX3 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal cone cell	3 studies	24% ± 6%	Explore
GABAergic neuron	3 studies	28% ± 2%	Explore
astrocyte	3 studies	18% ± 2%	Explore
glutamatergic neuron	3 studies	39% ± 5%	Explore
interneuron	3 studies	25% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	24% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	2135.62	245 / 245	100%	12.29	502 / 502
brain	100%	2015.06	2639 / 2642	100%	16.23	705 / 705
breast	100%	1981.20	459 / 459	99%	15.21	1111 / 1118
thymus	100%	2499.83	653 / 653	99%	12.54	601 / 605
uterus	100%	2525.52	170 / 170	99%	11.13	455 / 459
kidney	100%	1640.53	89 / 89	99%	10.32	891 / 901
adrenal gland	100%	2538.03	258 / 258	98%	10.50	226 / 230
pancreas	100%	1042.21	327 / 328	98%	8.54	175 / 178
lung	100%	1534.37	576 / 578	98%	9.52	1134 / 1155
esophagus	100%	2053.52	1445 / 1445	98%	12.26	179 / 183
ovary	100%	3125.26	180 / 180	97%	6.34	419 / 430
bladder	100%	2101.90	21 / 21	95%	7.64	480 / 504
skin	100%	1974.83	1808 / 1809	92%	10.38	433 / 472
liver	100%	813.36	225 / 226	92%	5.12	372 / 406
intestine	100%	2134.59	966 / 966	90%	5.84	472 / 527
stomach	100%	1566.42	359 / 359	90%	6.55	256 / 286
adipose	100%	1736.46	1204 / 1204	0%	0	0 / 0
blood vessel	100%	1801.63	1335 / 1335	0%	0	0 / 0
spleen	100%	2314.95	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	14.31	45 / 45
ureter	0%	0	0 / 0	100%	2.84	1 / 1
muscle	100%	1274.51	801 / 803	0%	0	0 / 0
heart	98%	1233.21	841 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	6.67	28 / 29
eye	0%	0	0 / 0	55%	2.93	44 / 80
peripheral blood	34%	565.00	313 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0