Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 6 studies | 26% ± 5% | |
glutamatergic neuron | 5 studies | 33% ± 23% | |
neuron | 3 studies | 21% ± 1% | |
endothelial cell | 3 studies | 26% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 31% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 97% | 660.77 | 1750 / 1809 | 98% | 80.05 | 462 / 472 |
brain | 96% | 2556.20 | 2525 / 2642 | 93% | 14.65 | 656 / 705 |
breast | 94% | 559.17 | 432 / 459 | 78% | 7.12 | 872 / 1118 |
uterus | 78% | 510.69 | 133 / 170 | 58% | 5.17 | 266 / 459 |
lung | 70% | 251.58 | 405 / 578 | 63% | 4.73 | 731 / 1155 |
bladder | 76% | 331.62 | 16 / 21 | 49% | 2.89 | 247 / 504 |
esophagus | 64% | 361.72 | 920 / 1445 | 56% | 3.76 | 102 / 183 |
ovary | 99% | 1613.97 | 179 / 180 | 19% | 1.57 | 81 / 430 |
intestine | 80% | 601.61 | 770 / 966 | 37% | 2.09 | 195 / 527 |
eye | 0% | 0 | 0 / 0 | 100% | 68.27 | 80 / 80 |
prostate | 83% | 407.34 | 204 / 245 | 15% | 0.45 | 77 / 502 |
pancreas | 23% | 99.79 | 76 / 328 | 74% | 4.14 | 131 / 178 |
adipose | 89% | 506.18 | 1077 / 1204 | 0% | 0 | 0 / 0 |
thymus | 62% | 214.83 | 407 / 653 | 26% | 1.54 | 156 / 605 |
adrenal gland | 11% | 42.46 | 28 / 258 | 61% | 8.54 | 141 / 230 |
peripheral blood | 71% | 334.86 | 662 / 929 | 0% | 0 | 0 / 0 |
stomach | 31% | 148.14 | 110 / 359 | 36% | 2.19 | 103 / 286 |
spleen | 61% | 215.04 | 148 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 52% | 2.48 | 15 / 29 |
tonsil | 0% | 0 | 0 / 0 | 47% | 2.19 | 21 / 45 |
kidney | 16% | 49.99 | 14 / 89 | 17% | 0.96 | 150 / 901 |
heart | 29% | 97.93 | 253 / 861 | 0% | 0 | 0 / 0 |
liver | 7% | 24.73 | 16 / 226 | 19% | 1.23 | 77 / 406 |
blood vessel | 19% | 69.35 | 253 / 1335 | 0% | 0 | 0 / 0 |
muscle | 6% | 19.60 | 52 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042756 | Biological process | drinking behavior |
GO_0030198 | Biological process | extracellular matrix organization |
GO_0001822 | Biological process | kidney development |
GO_0030574 | Biological process | collagen catabolic process |
GO_0006508 | Biological process | proteolysis |
GO_0005615 | Cellular component | extracellular space |
GO_0098552 | Cellular component | side of membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031012 | Cellular component | extracellular matrix |
GO_0004222 | Molecular function | metalloendopeptidase activity |
GO_0008047 | Molecular function | enzyme activator activity |
GO_0070006 | Molecular function | metalloaminopeptidase activity |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | MMP17 |
Protein name | Matrix metalloproteinase-17 (MMP-17) (EC 3.4.24.-) (Membrane-type matrix metalloproteinase 4) (MT-MMP 4) (MTMMP4) (Membrane-type-4 matrix metalloproteinase) (MT4-MMP) (MT4MMP) Matrix metallopeptidase 17 MMP17 protein |
Synonyms | MT4MMP |
Description | FUNCTION: Endopeptidase that degrades various components of the extracellular matrix, such as fibrin. May be involved in the activation of membrane-bound precursors of growth factors or inflammatory mediators, such as tumor necrosis factor-alpha. May also be involved in tumoral process. Cleaves pro-TNF-alpha at the '74-Ala-|-Gln-75' site. Not obvious if able to proteolytically activate progelatinase A. Does not hydrolyze collagen types I, II, III, IV and V, gelatin, fibronectin, laminin, decorin nor alpha1-antitrypsin. |
Accessions | ENST00000545790.6 ENST00000535291.5 [Q9ULZ9-2] F5GWR3 ENST00000360564.5 [Q9ULZ9-1] F5GZA7 ENST00000535004.2 F5H209 ENST00000545671.6 Q5U5M0 Q8IWC3 Q9ULZ9 |