Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 8 studies | 22% ± 4% | |
melanocyte | 5 studies | 34% ± 14% | |
non-classical monocyte | 4 studies | 36% ± 18% | |
plasmacytoid dendritic cell | 4 studies | 23% ± 5% | |
classical monocyte | 3 studies | 25% ± 6% | |
extravillous trophoblast | 3 studies | 22% ± 3% | |
myeloid cell | 3 studies | 33% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1572.76 | 1445 / 1445 | 100% | 39.58 | 183 / 183 |
pancreas | 100% | 1809.67 | 328 / 328 | 100% | 29.08 | 178 / 178 |
skin | 100% | 2251.37 | 1809 / 1809 | 100% | 265.06 | 472 / 472 |
stomach | 100% | 1435.56 | 359 / 359 | 100% | 38.76 | 285 / 286 |
intestine | 100% | 1646.58 | 966 / 966 | 100% | 37.22 | 525 / 527 |
uterus | 100% | 1527.35 | 170 / 170 | 100% | 34.57 | 457 / 459 |
kidney | 100% | 4448.25 | 89 / 89 | 99% | 37.89 | 896 / 901 |
prostate | 100% | 1990.20 | 245 / 245 | 99% | 31.92 | 499 / 502 |
brain | 100% | 1935.55 | 2629 / 2642 | 100% | 28.31 | 704 / 705 |
breast | 100% | 1668.36 | 459 / 459 | 99% | 30.58 | 1106 / 1118 |
ovary | 100% | 1354.32 | 180 / 180 | 99% | 28.63 | 425 / 430 |
thymus | 100% | 2270.56 | 653 / 653 | 99% | 23.00 | 597 / 605 |
lung | 100% | 2316.88 | 578 / 578 | 99% | 28.87 | 1138 / 1155 |
bladder | 100% | 1617.71 | 21 / 21 | 98% | 31.80 | 496 / 504 |
adrenal gland | 100% | 1947.83 | 258 / 258 | 96% | 25.96 | 221 / 230 |
liver | 100% | 1450.26 | 226 / 226 | 96% | 18.12 | 388 / 406 |
adipose | 100% | 1779.38 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 190.59 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.83 | 29 / 29 |
spleen | 100% | 3029.00 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.08 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.80 | 1 / 1 |
blood vessel | 100% | 1436.27 | 1332 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1718.50 | 922 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 869.32 | 840 / 861 | 0% | 0 | 0 / 0 |
muscle | 86% | 667.43 | 691 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048022 | Biological process | negative regulation of melanin biosynthetic process |
GO_0043474 | Biological process | pigment metabolic process involved in pigmentation |
GO_0008643 | Biological process | carbohydrate transport |
GO_0048021 | Biological process | regulation of melanin biosynthetic process |
GO_1903712 | Biological process | cysteine transmembrane transport |
GO_0042438 | Biological process | melanin biosynthetic process |
GO_0033162 | Cellular component | melanosome membrane |
GO_0005764 | Cellular component | lysosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0042470 | Cellular component | melanosome |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005770 | Cellular component | late endosome |
GO_0005215 | Molecular function | transporter activity |
GO_0015293 | Molecular function | symporter activity |
GO_0033229 | Molecular function | cysteine transmembrane transporter activity |
Gene name | MFSD12 |
Protein name | Major facilitator superfamily domain-containing protein 12 Major facilitator superfamily domain containing 12 |
Synonyms | C19orf28 |
Description | FUNCTION: Transporter that mediates the import of cysteine into melanosomes, thereby regulating skin pigmentation . In melanosomes, cysteine import is required both for normal levels of cystine, the oxidized dimer of cysteine, and provide cysteine for the production of the cysteinyldopas used in pheomelanin synthesis, thereby regulating skin pigmentation . Also catalyzes import of cysteine into lysosomes in non-pigmented cells, regulating lysosomal cystine and cysteine storage, which is essnetial for redox homeostasis . . |
Accessions | ENST00000592652.1 K7ERJ8 ENST00000615073.4 K7ENE1 A0A0A0MS91 ENST00000589063.5 ENST00000355415.7 [Q6NUT3-1] Q6NUT3 ENST00000398558.8 ENST00000589995.1 A0A087WU85 K7EKU1 K7EJS5 ENST00000588626.1 ENST00000588918.5 [Q6NUT3-2] K7EQ22 ENST00000585814.1 |