Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 42% ± 22% | |
oligodendrocyte | 15 studies | 51% ± 20% | |
oligodendrocyte precursor cell | 8 studies | 31% ± 11% | |
Mueller cell | 6 studies | 26% ± 7% | |
GABAergic neuron | 3 studies | 20% ± 3% | |
glutamatergic neuron | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 31% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2244.38 | 2636 / 2642 | 97% | 14.15 | 684 / 705 |
adrenal gland | 88% | 449.69 | 226 / 258 | 47% | 5.01 | 108 / 230 |
muscle | 91% | 640.74 | 730 / 803 | 0% | 0 | 0 / 0 |
breast | 34% | 121.44 | 156 / 459 | 49% | 2.83 | 543 / 1118 |
skin | 18% | 49.79 | 322 / 1809 | 57% | 11.80 | 271 / 472 |
uterus | 42% | 139.19 | 71 / 170 | 12% | 1.58 | 56 / 459 |
prostate | 21% | 62.16 | 52 / 245 | 32% | 0.58 | 163 / 502 |
intestine | 42% | 174.90 | 403 / 966 | 3% | 0.07 | 18 / 527 |
tonsil | 0% | 0 | 0 / 0 | 40% | 4.61 | 18 / 45 |
eye | 0% | 0 | 0 / 0 | 39% | 2.54 | 31 / 80 |
esophagus | 18% | 47.54 | 258 / 1445 | 18% | 0.60 | 33 / 183 |
ovary | 1% | 2.11 | 2 / 180 | 22% | 0.66 | 94 / 430 |
lung | 0% | 0.76 | 1 / 578 | 23% | 1.14 | 262 / 1155 |
blood vessel | 14% | 64.44 | 188 / 1335 | 0% | 0 | 0 / 0 |
heart | 12% | 33.09 | 101 / 861 | 0% | 0 | 0 / 0 |
stomach | 7% | 22.41 | 25 / 359 | 3% | 0.09 | 10 / 286 |
pancreas | 0% | 0 | 0 / 328 | 10% | 0.16 | 17 / 178 |
thymus | 0% | 0 | 0 / 653 | 8% | 0.26 | 51 / 605 |
bladder | 0% | 0 | 0 / 21 | 3% | 0.12 | 15 / 504 |
kidney | 0% | 0 | 0 / 89 | 2% | 0.06 | 16 / 901 |
adipose | 1% | 2.54 | 10 / 1204 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 1% | 0.02 | 3 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0014841 | Biological process | skeletal muscle satellite cell proliferation |
GO_0014816 | Biological process | skeletal muscle satellite cell differentiation |
GO_0055001 | Biological process | muscle cell development |
GO_0051147 | Biological process | regulation of muscle cell differentiation |
GO_0033002 | Biological process | muscle cell proliferation |
GO_2000288 | Biological process | positive regulation of myoblast proliferation |
GO_0034109 | Biological process | homotypic cell-cell adhesion |
GO_0043277 | Biological process | apoptotic cell clearance |
GO_0048641 | Biological process | regulation of skeletal muscle tissue development |
GO_0014719 | Biological process | skeletal muscle satellite cell activation |
GO_1902742 | Biological process | apoptotic process involved in development |
GO_0048627 | Biological process | myoblast development |
GO_0051451 | Biological process | myoblast migration |
GO_0043654 | Biological process | recognition of apoptotic cell |
GO_0043652 | Biological process | engulfment of apoptotic cell |
GO_0022409 | Biological process | positive regulation of cell-cell adhesion |
GO_0005886 | Cellular component | plasma membrane |
GO_0001891 | Cellular component | phagocytic cup |
GO_0042995 | Cellular component | cell projection |
GO_0005112 | Molecular function | Notch binding |
GO_0005044 | Molecular function | scavenger receptor activity |
GO_0001849 | Molecular function | complement component C1q complex binding |
Gene name | MEGF10 |
Protein name | Multiple epidermal growth factor-like domains protein 10 (Multiple EGF-like domains protein 10) |
Synonyms | KIAA1780 |
Description | FUNCTION: Membrane receptor involved in phagocytosis by macrophages and astrocytes of apoptotic cells. Receptor for C1q, an eat-me signal, that binds phosphatidylserine expressed on the surface of apoptotic cells . Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides . Necessary for astrocyte-dependent apoptotic neuron clearance in the developing cerebellum . Plays role in muscle cell proliferation, adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation through regulation of the notch signaling pathway . May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements . . |
Accessions | ENST00000508365.5 [Q96KG7-2] Q96KG7 ENST00000503335.7 [Q96KG7-1] ENST00000418761.6 [Q96KG7-2] ENST00000274473.6 [Q96KG7-1] |