Insufficient scRNA-seq data for expression of MDGA1 at single-cell level.
Insufficient scRNA-seq data for expression of MDGA1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 11339.45 | 2614 / 2642 | 99% | 8.44 | 699 / 705 |
adrenal gland | 95% | 893.84 | 244 / 258 | 96% | 20.91 | 221 / 230 |
uterus | 99% | 1902.30 | 169 / 170 | 72% | 4.05 | 329 / 459 |
lung | 96% | 1014.93 | 553 / 578 | 64% | 3.65 | 744 / 1155 |
breast | 89% | 594.65 | 409 / 459 | 71% | 2.05 | 791 / 1118 |
prostate | 95% | 935.71 | 233 / 245 | 64% | 1.47 | 321 / 502 |
esophagus | 94% | 1097.18 | 1364 / 1445 | 61% | 4.55 | 111 / 183 |
bladder | 100% | 753.67 | 21 / 21 | 44% | 1.89 | 223 / 504 |
skin | 75% | 1284.16 | 1359 / 1809 | 68% | 2.99 | 320 / 472 |
ovary | 100% | 2258.05 | 180 / 180 | 41% | 1.00 | 177 / 430 |
intestine | 94% | 1011.56 | 905 / 966 | 24% | 0.54 | 126 / 527 |
thymus | 85% | 568.62 | 553 / 653 | 30% | 0.58 | 184 / 605 |
stomach | 74% | 673.01 | 265 / 359 | 40% | 0.87 | 114 / 286 |
kidney | 52% | 288.65 | 46 / 89 | 50% | 1.21 | 454 / 901 |
blood vessel | 99% | 1272.27 | 1321 / 1335 | 0% | 0 | 0 / 0 |
adipose | 93% | 789.97 | 1116 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 3.99 | 40 / 45 |
pancreas | 10% | 37.27 | 32 / 328 | 76% | 2.06 | 136 / 178 |
spleen | 85% | 1313.96 | 206 / 241 | 0% | 0 | 0 / 0 |
heart | 80% | 460.37 | 685 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 56% | 2.19 | 45 / 80 |
peripheral blood | 40% | 315.23 | 371 / 929 | 0% | 0 | 0 / 0 |
liver | 8% | 25.79 | 18 / 226 | 27% | 1.27 | 109 / 406 |
lymph node | 0% | 0 | 0 / 0 | 34% | 0.95 | 10 / 29 |
muscle | 14% | 46.28 | 109 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007420 | Biological process | brain development |
GO_0099179 | Biological process | regulation of synaptic membrane adhesion |
GO_0001764 | Biological process | neuron migration |
GO_0021527 | Biological process | spinal cord association neuron differentiation |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0007399 | Biological process | nervous system development |
GO_0021799 | Biological process | cerebral cortex radially oriented cell migration |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0005615 | Cellular component | extracellular space |
GO_0098552 | Cellular component | side of membrane |
GO_0005576 | Cellular component | extracellular region |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005886 | Cellular component | plasma membrane |
GO_0003674 | Molecular function | molecular_function |
Gene name | MDGA1 |
Protein name | Alternative protein MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 MAM domain-containing glycosylphosphatidylinositol anchor protein 1 (GPI and MAM protein) (GPIM) (Glycosylphosphatidylinositol-MAM) (MAM domain-containing protein 3) |
Synonyms | MAMDC3 |
Description | FUNCTION: Required for radial migration of cortical neurons in the superficial layer of the neocortex (By similarity). Plays a role in the formation or maintenance of inhibitory synapses. May function by inhibiting the activity of NLGN2. . |
Accessions | ENST00000650466.1 Q8NFP4 ENST00000505425.5 [Q8NFP4-2] ENST00000508399.1 H0YA23 H0Y4Q2 L8EAS0 ENST00000680397.1 ENST00000681439.1 A0A7P0TB62 D6RHU8 ENST00000515437.5 A0A7P0TB21 A0A3B3IU48 D6RFG6 A0A7P0T822 ENST00000418178.2 ENST00000502298.1 ENST00000434837.8 [Q8NFP4-1] ENST00000681472.1 |