LYSMD4 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	24% ± 4%	Explore
glutamatergic neuron	3 studies	31% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	26% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1085.56	1445 / 1445	100%	6.01	183 / 183
intestine	100%	956.09	966 / 966	100%	4.62	526 / 527
uterus	100%	1277.84	170 / 170	100%	7.27	458 / 459
thymus	100%	655.56	652 / 653	100%	5.65	603 / 605
lung	100%	881.39	577 / 578	100%	5.28	1151 / 1155
bladder	100%	735.05	21 / 21	99%	4.58	500 / 504
prostate	100%	966.88	245 / 245	99%	3.59	497 / 502
stomach	100%	652.31	359 / 359	99%	4.29	282 / 286
pancreas	100%	562.93	327 / 328	99%	5.10	176 / 178
skin	100%	1488.86	1809 / 1809	99%	4.18	465 / 472
kidney	100%	664.45	89 / 89	98%	4.04	887 / 901
brain	100%	1002.33	2631 / 2642	98%	4.30	693 / 705
adrenal gland	100%	473.09	257 / 258	98%	5.00	226 / 230
breast	100%	804.87	459 / 459	97%	3.61	1081 / 1118
liver	97%	483.60	220 / 226	99%	4.00	400 / 406
ovary	100%	935.56	180 / 180	94%	2.81	405 / 430
lymph node	0%	0	0 / 0	100%	3.68	29 / 29
spleen	100%	656.94	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	6.53	45 / 45
ureter	0%	0	0 / 0	100%	1.96	1 / 1
adipose	100%	734.91	1203 / 1204	0%	0	0 / 0
blood vessel	100%	753.75	1333 / 1335	0%	0	0 / 0
muscle	100%	709.95	799 / 803	0%	0	0 / 0
heart	99%	824.95	850 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	98%	3.64	78 / 80
peripheral blood	52%	237.85	479 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0