LRRC37A2 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
microglial cell	4 studies	19% ± 3%	Explore
oligodendrocyte	4 studies	20% ± 4%	Explore
endothelial cell	3 studies	22% ± 6%	Explore
glutamatergic neuron	3 studies	35% ± 16%	Explore
astrocyte	3 studies	22% ± 3%	Explore
oligodendrocyte precursor cell	3 studies	25% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	36% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	98%	504.72	1421 / 1445	95%	2.78	173 / 183
prostate	100%	829.30	245 / 245	81%	1.85	407 / 502
breast	99%	571.99	456 / 459	82%	2.11	912 / 1118
brain	96%	618.47	2542 / 2642	83%	2.09	588 / 705
lung	99%	604.24	570 / 578	78%	1.77	903 / 1155
stomach	98%	395.42	352 / 359	73%	1.70	210 / 286
pancreas	94%	294.87	308 / 328	75%	1.49	134 / 178
thymus	100%	704.68	650 / 653	69%	1.47	419 / 605
intestine	99%	557.11	959 / 966	65%	1.33	345 / 527
uterus	99%	720.35	168 / 170	66%	1.41	301 / 459
ovary	99%	589.01	178 / 180	65%	1.48	278 / 430
bladder	100%	553.43	21 / 21	63%	1.40	320 / 504
skin	99%	642.46	1788 / 1809	63%	1.15	298 / 472
kidney	97%	475.83	86 / 89	60%	1.21	541 / 901
adrenal gland	98%	422.96	254 / 258	54%	1.09	124 / 230
liver	86%	235.54	195 / 226	22%	0.37	90 / 406
spleen	100%	702.17	241 / 241	0%	0	0 / 0
adipose	98%	504.10	1185 / 1204	0%	0	0 / 0
blood vessel	98%	464.36	1306 / 1335	0%	0	0 / 0
peripheral blood	94%	411.92	874 / 929	0%	0	0 / 0
muscle	94%	393.30	755 / 803	0%	0	0 / 0
heart	83%	243.60	716 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	62%	1.25	28 / 45
lymph node	0%	0	0 / 0	62%	1.35	18 / 29
eye	0%	0	0 / 0	44%	0.73	35 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1