Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 7 studies | 23% ± 6% | |
astrocyte | 4 studies | 22% ± 3% | |
GABAergic neuron | 3 studies | 23% ± 5% | |
glutamatergic neuron | 3 studies | 33% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1005.95 | 2641 / 2642 | 100% | 6.02 | 705 / 705 |
thymus | 100% | 947.36 | 653 / 653 | 100% | 4.77 | 604 / 605 |
prostate | 100% | 766.11 | 245 / 245 | 100% | 3.81 | 501 / 502 |
breast | 100% | 584.36 | 458 / 459 | 99% | 4.67 | 1104 / 1118 |
ovary | 100% | 678.74 | 180 / 180 | 97% | 2.98 | 416 / 430 |
pancreas | 98% | 292.11 | 323 / 328 | 98% | 2.69 | 174 / 178 |
kidney | 100% | 737.02 | 89 / 89 | 93% | 3.83 | 836 / 901 |
bladder | 100% | 547.24 | 21 / 21 | 92% | 2.17 | 464 / 504 |
adrenal gland | 99% | 523.82 | 256 / 258 | 91% | 2.59 | 209 / 230 |
intestine | 100% | 536.27 | 966 / 966 | 87% | 1.72 | 460 / 527 |
lung | 98% | 574.26 | 568 / 578 | 89% | 2.35 | 1028 / 1155 |
stomach | 100% | 414.30 | 358 / 359 | 87% | 1.72 | 250 / 286 |
skin | 100% | 456.78 | 1804 / 1809 | 85% | 1.87 | 399 / 472 |
uterus | 100% | 689.49 | 170 / 170 | 84% | 2.31 | 385 / 459 |
liver | 94% | 238.58 | 213 / 226 | 63% | 1.26 | 255 / 406 |
esophagus | 99% | 402.29 | 1431 / 1445 | 57% | 1.08 | 105 / 183 |
spleen | 100% | 954.89 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.81 | 1 / 1 |
adipose | 100% | 448.16 | 1199 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 3.98 | 79 / 80 |
blood vessel | 99% | 332.37 | 1316 / 1335 | 0% | 0 | 0 / 0 |
heart | 91% | 281.29 | 785 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 1.94 | 26 / 29 |
tonsil | 0% | 0 | 0 / 0 | 73% | 1.79 | 33 / 45 |
peripheral blood | 62% | 173.55 | 580 / 929 | 0% | 0 | 0 / 0 |
muscle | 62% | 129.86 | 501 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0055013 | Biological process | cardiac muscle cell development |
GO_0005856 | Cellular component | cytoskeleton |
GO_0030017 | Cellular component | sarcomere |
GO_0003779 | Molecular function | actin binding |
Gene name | LRRC27 |
Protein name | Leucine-rich repeat-containing protein 27 |
Synonyms | KIAA1674 |
Description | |
Accessions | ENST00000368614.8 [Q9C0I9-1] ENST00000344079.9 [Q9C0I9-3] ENST00000368612.3 [Q9C0I9-2] Q9C0I9 ENST00000368613.8 [Q9C0I9-1] ENST00000625755.2 [Q9C0I9-4] |