LRCOL1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
pericyte	4 studies	21% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	727.83	226 / 226	60%	7.36	242 / 406
thymus	98%	59.38	638 / 653	42%	2.50	257 / 605
lung	100%	236.96	576 / 578	11%	0.25	122 / 1155
kidney	93%	51.46	83 / 89	15%	0.44	133 / 901
uterus	95%	45.12	162 / 170	9%	0.38	42 / 459
breast	98%	41.69	448 / 459	6%	0.13	65 / 1118
spleen	100%	91.63	241 / 241	0%	0	0 / 0
prostate	96%	42.46	235 / 245	1%	0.04	6 / 502
ovary	74%	23.34	134 / 180	19%	0.59	82 / 430
esophagus	88%	24.22	1272 / 1445	3%	0.06	6 / 183
adipose	88%	27.62	1065 / 1204	0%	0	0 / 0
adrenal gland	86%	22.29	222 / 258	2%	0.07	5 / 230
intestine	83%	27.78	802 / 966	1%	0.04	6 / 527
bladder	76%	17.67	16 / 21	4%	0.13	21 / 504
skin	51%	7.85	914 / 1809	25%	0.59	116 / 472
brain	44%	6.02	1151 / 2642	19%	0.41	134 / 705
heart	52%	7.23	448 / 861	0%	0	0 / 0
stomach	49%	10.61	175 / 359	1%	0.01	2 / 286
lymph node	0%	0	0 / 0	38%	1.28	11 / 29
blood vessel	31%	5.74	410 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	16%	0.26	13 / 80
pancreas	12%	1.27	38 / 328	1%	0.01	2 / 178
muscle	11%	1.08	89 / 803	0%	0	0 / 0
peripheral blood	3%	0.51	27 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1