Insufficient scRNA-seq data for expression of LINGO4 at single-cell level.
Insufficient scRNA-seq data for expression of LINGO4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 80% | 125.34 | 195 / 245 | 88% | 3.20 | 443 / 502 |
thymus | 84% | 106.11 | 548 / 653 | 70% | 2.01 | 424 / 605 |
muscle | 100% | 1937.95 | 803 / 803 | 0% | 0 | 0 / 0 |
liver | 62% | 81.43 | 140 / 226 | 35% | 1.38 | 144 / 406 |
adrenal gland | 16% | 24.63 | 41 / 258 | 65% | 6.31 | 150 / 230 |
kidney | 54% | 37.19 | 48 / 89 | 22% | 0.49 | 200 / 901 |
breast | 36% | 23.47 | 163 / 459 | 39% | 1.15 | 435 / 1118 |
pancreas | 45% | 33.54 | 148 / 328 | 16% | 0.31 | 29 / 178 |
skin | 58% | 54.81 | 1045 / 1809 | 2% | 0.04 | 9 / 472 |
heart | 48% | 38.07 | 412 / 861 | 0% | 0 | 0 / 0 |
brain | 26% | 137.94 | 695 / 2642 | 11% | 0.26 | 80 / 705 |
ovary | 1% | 0.51 | 2 / 180 | 23% | 0.77 | 98 / 430 |
lung | 12% | 6.62 | 69 / 578 | 10% | 0.28 | 120 / 1155 |
stomach | 19% | 15.27 | 69 / 359 | 1% | 0.03 | 4 / 286 |
spleen | 16% | 8.12 | 39 / 241 | 0% | 0 | 0 / 0 |
intestine | 12% | 7.41 | 112 / 966 | 4% | 0.12 | 20 / 527 |
uterus | 5% | 6.82 | 8 / 170 | 6% | 0.18 | 29 / 459 |
esophagus | 2% | 1.13 | 34 / 1445 | 4% | 0.11 | 7 / 183 |
adipose | 3% | 2.18 | 42 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.05 | 2 / 80 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.04 | 1 / 45 |
bladder | 0% | 0 | 0 / 21 | 2% | 0.05 | 10 / 504 |
peripheral blood | 2% | 0.99 | 17 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 1.49 | 5 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0031012 | Cellular component | extracellular matrix |
GO_0016020 | Cellular component | membrane |
GO_0005615 | Cellular component | extracellular space |
Gene name | LINGO4 |
Protein name | Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4 (Leucine-rich repeat neuronal protein 6D) |
Synonyms | UNQ9248/PRO34002 LRRN6D |
Description | |
Accessions | Q6UY18 ENST00000368820.4 |