Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 6 studies | 31% ± 9% |
Insufficient scRNA-seq data for expression of LINC00862 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 99% | 82.34 | 224 / 226 | 21% | 0.57 | 84 / 406 |
lung | 93% | 27.53 | 537 / 578 | 18% | 0.52 | 205 / 1155 |
breast | 78% | 41.31 | 358 / 459 | 27% | 0.76 | 301 / 1118 |
spleen | 98% | 52.04 | 236 / 241 | 0% | 0 | 0 / 0 |
brain | 91% | 20.05 | 2396 / 2642 | 6% | 0.09 | 45 / 705 |
peripheral blood | 93% | 91.78 | 866 / 929 | 0% | 0 | 0 / 0 |
kidney | 79% | 13.97 | 70 / 89 | 6% | 0.14 | 54 / 901 |
pancreas | 77% | 10.70 | 251 / 328 | 1% | 0.03 | 2 / 178 |
prostate | 73% | 11.04 | 179 / 245 | 1% | 0.05 | 3 / 502 |
stomach | 66% | 9.29 | 237 / 359 | 4% | 0.13 | 12 / 286 |
skin | 53% | 15.34 | 964 / 1809 | 8% | 0.16 | 39 / 472 |
adrenal gland | 61% | 8.00 | 157 / 258 | 0% | 0.00 | 1 / 230 |
intestine | 55% | 6.98 | 532 / 966 | 2% | 0.03 | 9 / 527 |
thymus | 55% | 8.00 | 356 / 653 | 0% | 0.00 | 1 / 605 |
adipose | 50% | 7.13 | 606 / 1204 | 0% | 0 | 0 / 0 |
uterus | 43% | 5.46 | 73 / 170 | 4% | 0.21 | 18 / 459 |
bladder | 38% | 5.81 | 8 / 21 | 5% | 0.17 | 25 / 504 |
muscle | 41% | 4.83 | 326 / 803 | 0% | 0 | 0 / 0 |
esophagus | 29% | 2.94 | 423 / 1445 | 8% | 0.17 | 14 / 183 |
lymph node | 0% | 0 | 0 / 0 | 31% | 1.91 | 9 / 29 |
heart | 30% | 3.44 | 254 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 27% | 2.85 | 359 / 1335 | 0% | 0 | 0 / 0 |
ovary | 21% | 2.82 | 37 / 180 | 0% | 0.00 | 1 / 430 |
eye | 0% | 0 | 0 / 0 | 3% | 0.03 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
Gene name | LINC00862 |
Protein name | Putative transmembrane protein encoded by LINC00862 (Small integral membrane protein 16) |
Synonyms | C1orf98 SMIM16 |
Description | |
Accessions | A6NCI5 |