Insufficient scRNA-seq data for expression of LIM2 at single-cell level.
Insufficient scRNA-seq data for expression of LIM2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
spleen | 83% | 6.11 | 201 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 79% | 23.65 | 731 / 929 | 0% | 0 | 0 / 0 |
lung | 58% | 2.98 | 334 / 578 | 1% | 0.06 | 12 / 1155 |
liver | 21% | 0.62 | 48 / 226 | 0% | 0.01 | 2 / 406 |
uterus | 16% | 0.52 | 27 / 170 | 4% | 0.24 | 17 / 459 |
esophagus | 13% | 0.49 | 191 / 1445 | 4% | 0.15 | 7 / 183 |
adipose | 17% | 0.46 | 204 / 1204 | 0% | 0 | 0 / 0 |
breast | 15% | 0.47 | 68 / 459 | 0% | 0.02 | 3 / 1118 |
bladder | 14% | 0.29 | 3 / 21 | 0% | 0 | 0 / 504 |
thymus | 11% | 0.27 | 73 / 653 | 2% | 0.08 | 14 / 605 |
prostate | 13% | 0.44 | 33 / 245 | 0% | 0 | 0 / 502 |
heart | 11% | 0.25 | 92 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.22 | 3 / 29 |
kidney | 9% | 0.20 | 8 / 89 | 1% | 0.02 | 5 / 901 |
muscle | 9% | 0.22 | 73 / 803 | 0% | 0 | 0 / 0 |
brain | 6% | 0.14 | 154 / 2642 | 0% | 0.00 | 1 / 705 |
ovary | 5% | 0.11 | 9 / 180 | 1% | 0.02 | 4 / 430 |
blood vessel | 5% | 0.12 | 67 / 1335 | 0% | 0 | 0 / 0 |
stomach | 3% | 0.09 | 12 / 359 | 1% | 0.02 | 4 / 286 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.14 | 2 / 45 |
adrenal gland | 4% | 0.11 | 11 / 258 | 0% | 0 | 0 / 230 |
intestine | 4% | 0.10 | 38 / 966 | 0% | 0.00 | 1 / 527 |
skin | 4% | 0.09 | 64 / 1809 | 0% | 0 | 0 / 472 |
pancreas | 2% | 0.05 | 7 / 328 | 0% | 0 | 0 / 178 |
eye | 0% | 0 | 0 / 0 | 1% | 0.14 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002088 | Biological process | lens development in camera-type eye |
GO_0007043 | Biological process | cell-cell junction assembly |
GO_0030054 | Cellular component | cell junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0031982 | Cellular component | vesicle |
GO_0005212 | Molecular function | structural constituent of eye lens |
Gene name | LIM2 |
Protein name | Lens intrinsic membrane protein 2 Lens fiber membrane intrinsic protein (MP18) (MP19) (MP20) |
Synonyms | |
Description | FUNCTION: Present in the thicker 16-17 nm junctions of mammalian lens fiber cells, where it may contribute to cell junctional organization. Acts as a receptor for calmodulin. May play an important role in both lens development and cataractogenesis. |
Accessions | A0A140CTX9 ENST00000596399.2 [P55344-1] ENST00000221973.7 [P55344-2] A0A1B3B2I7 P55344 A0A1B3B2I8 |