Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| astrocyte | 17 studies | 37% ± 19% | |
| pericyte | 15 studies | 27% ± 12% | |
| smooth muscle cell | 12 studies | 24% ± 6% | |
| glial cell | 6 studies | 57% ± 20% | |
| neuron | 3 studies | 22% ± 6% | |
| muscle cell | 3 studies | 21% ± 1% | |
| glutamatergic neuron | 3 studies | 36% ± 18% | |
| Schwann cell | 3 studies | 78% ± 13% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 26% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 98% | 5689.08 | 2594 / 2642 | 97% | 22.82 | 681 / 705 |
| prostate | 97% | 5277.82 | 238 / 245 | 87% | 5.40 | 436 / 502 |
| skin | 60% | 1813.09 | 1077 / 1809 | 81% | 53.75 | 384 / 472 |
| uterus | 99% | 6417.99 | 169 / 170 | 39% | 2.50 | 178 / 459 |
| intestine | 97% | 9311.89 | 933 / 966 | 42% | 1.89 | 219 / 527 |
| breast | 98% | 5172.90 | 450 / 459 | 37% | 1.52 | 417 / 1118 |
| bladder | 95% | 4739.62 | 20 / 21 | 39% | 2.22 | 197 / 504 |
| thymus | 91% | 2783.97 | 597 / 653 | 40% | 1.58 | 244 / 605 |
| esophagus | 84% | 6816.16 | 1210 / 1445 | 25% | 1.05 | 45 / 183 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.95 | 1 / 1 |
| stomach | 58% | 2933.96 | 207 / 359 | 42% | 2.44 | 121 / 286 |
| adipose | 98% | 8038.00 | 1177 / 1204 | 0% | 0 | 0 / 0 |
| lung | 73% | 1826.15 | 421 / 578 | 22% | 0.81 | 250 / 1155 |
| muscle | 92% | 3230.29 | 739 / 803 | 0% | 0 | 0 / 0 |
| pancreas | 5% | 91.80 | 18 / 328 | 78% | 4.58 | 138 / 178 |
| blood vessel | 80% | 4283.13 | 1074 / 1335 | 0% | 0 | 0 / 0 |
| heart | 77% | 2522.64 | 660 / 861 | 0% | 0 | 0 / 0 |
| kidney | 12% | 194.97 | 11 / 89 | 60% | 41.66 | 540 / 901 |
| adrenal gland | 8% | 165.44 | 20 / 258 | 57% | 7.02 | 131 / 230 |
| ovary | 44% | 1414.24 | 79 / 180 | 14% | 0.79 | 61 / 430 |
| eye | 0% | 0 | 0 / 0 | 51% | 10.47 | 41 / 80 |
| liver | 8% | 136.42 | 19 / 226 | 41% | 2.67 | 166 / 406 |
| tonsil | 0% | 0 | 0 / 0 | 20% | 0.54 | 9 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 10% | 0.26 | 3 / 29 |
| spleen | 0% | 5.09 | 1 / 241 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0008344 | Biological process | adult locomotory behavior |
| GO_0031641 | Biological process | regulation of myelination |
| GO_0042551 | Biological process | neuron maturation |
| GO_0014009 | Biological process | glial cell proliferation |
| GO_0022011 | Biological process | myelination in peripheral nervous system |
| GO_0005615 | Cellular component | extracellular space |
| GO_0005576 | Cellular component | extracellular region |
| Gene name | LGI4 |
| Protein name | Leucine-rich repeat LGI family member 4 (LGI1-like protein 3) (Leucine-rich glioma-inactivated protein 4) LGI4 protein Leucine rich repeat LGI family member 4 |
| Synonyms | UNQ6515/PRO21485 LGIL3 |
| Description | FUNCTION: Component of Schwann cell signaling pathway(s) that controls axon segregation and myelin formation (By similarity). . |
| Accessions | ENST00000392225.7 K7ENQ0 ENST00000591633.2 [Q8N135-2] A8MVC2 A5D6Y5 ENST00000587780.5 ENST00000310123.8 [Q8N135-1] Q8N135 |
