Insufficient scRNA-seq data for expression of LCN8 at single-cell level.
Insufficient scRNA-seq data for expression of LCN8 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 98% | 178.21 | 642 / 653 | 37% | 1.60 | 226 / 605 |
spleen | 90% | 207.11 | 217 / 241 | 0% | 0 | 0 / 0 |
muscle | 79% | 76.71 | 637 / 803 | 0% | 0 | 0 / 0 |
uterus | 57% | 23.42 | 97 / 170 | 2% | 0.09 | 10 / 459 |
brain | 52% | 473.82 | 1369 / 2642 | 0% | 0.01 | 1 / 705 |
ovary | 36% | 19.16 | 65 / 180 | 14% | 0.59 | 62 / 430 |
peripheral blood | 38% | 32.84 | 352 / 929 | 0% | 0 | 0 / 0 |
kidney | 27% | 11.47 | 24 / 89 | 2% | 0.07 | 20 / 901 |
breast | 28% | 9.87 | 129 / 459 | 1% | 0.03 | 9 / 1118 |
intestine | 24% | 43.72 | 233 / 966 | 5% | 0.14 | 24 / 527 |
prostate | 24% | 9.74 | 60 / 245 | 1% | 0.01 | 3 / 502 |
lung | 15% | 3.97 | 88 / 578 | 1% | 0.04 | 17 / 1155 |
stomach | 13% | 4.46 | 46 / 359 | 2% | 0.02 | 5 / 286 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.28 | 4 / 29 |
esophagus | 9% | 2.14 | 126 / 1445 | 1% | 0.11 | 2 / 183 |
adipose | 7% | 1.59 | 90 / 1204 | 0% | 0 | 0 / 0 |
bladder | 5% | 2.62 | 1 / 21 | 1% | 0.01 | 3 / 504 |
skin | 3% | 0.63 | 62 / 1809 | 1% | 0.06 | 7 / 472 |
tonsil | 0% | 0 | 0 / 0 | 4% | 0.11 | 2 / 45 |
liver | 4% | 0.81 | 9 / 226 | 0% | 0 | 0 / 406 |
blood vessel | 4% | 1.14 | 49 / 1335 | 0% | 0 | 0 / 0 |
heart | 3% | 0.43 | 25 / 861 | 0% | 0 | 0 / 0 |
pancreas | 0% | 0.05 | 1 / 328 | 2% | 0.10 | 4 / 178 |
adrenal gland | 1% | 1.10 | 2 / 258 | 0% | 0 | 0 / 230 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009725 | Biological process | response to hormone |
GO_0005576 | Cellular component | extracellular region |
GO_0036094 | Molecular function | small molecule binding |
Gene name | LCN8 |
Protein name | Epididymal-specific lipocalin-8 |
Synonyms | LCN5 |
Description | FUNCTION: May play a role in male fertility. May act as a retinoid carrier protein within the epididymis. |
Accessions | ENST00000612714.1 [Q6JVE9-1] Q6JVE9 ENST00000371688.8 [Q6JVE9-2] |