IQCD report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	34% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	142.18	2631 / 2642	100%	5.35	702 / 705
thymus	100%	165.69	652 / 653	99%	5.61	598 / 605
ovary	99%	119.72	179 / 180	99%	6.90	425 / 430
breast	95%	85.70	438 / 459	96%	5.09	1068 / 1118
kidney	100%	192.02	89 / 89	91%	5.57	818 / 901
prostate	98%	68.79	239 / 245	92%	2.15	461 / 502
uterus	100%	129.54	170 / 170	89%	5.05	408 / 459
adrenal gland	97%	75.83	250 / 258	89%	2.56	204 / 230
lung	99%	220.53	574 / 578	85%	4.91	983 / 1155
skin	97%	57.12	1748 / 1809	84%	2.36	396 / 472
pancreas	79%	31.66	259 / 328	98%	3.82	174 / 178
intestine	96%	53.75	930 / 966	76%	1.82	403 / 527
bladder	81%	46.52	17 / 21	80%	2.99	403 / 504
esophagus	95%	77.64	1377 / 1445	61%	1.45	112 / 183
stomach	62%	27.27	221 / 359	66%	1.42	190 / 286
ureter	0%	0	0 / 0	100%	5.88	1 / 1
blood vessel	98%	64.60	1308 / 1335	0%	0	0 / 0
adipose	93%	58.12	1114 / 1204	0%	0	0 / 0
heart	90%	64.88	777 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	82%	2.53	37 / 45
lymph node	0%	0	0 / 0	76%	4.75	22 / 29
eye	0%	0	0 / 0	59%	0.92	47 / 80
liver	7%	2.24	16 / 226	50%	1.82	204 / 406
spleen	56%	16.78	136 / 241	0%	0	0 / 0
muscle	41%	16.91	330 / 803	0%	0	0 / 0
peripheral blood	32%	24.21	294 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0