Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 11 studies | 38% ± 17% | |
glutamatergic neuron | 6 studies | 39% ± 23% | |
GABAergic neuron | 4 studies | 41% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 32% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 99% | 691.45 | 648 / 653 | 80% | 2.61 | 485 / 605 |
brain | 76% | 612.81 | 1997 / 2642 | 98% | 24.99 | 693 / 705 |
prostate | 88% | 593.07 | 216 / 245 | 82% | 2.34 | 412 / 502 |
esophagus | 77% | 1277.03 | 1107 / 1445 | 57% | 2.39 | 104 / 183 |
intestine | 78% | 879.58 | 749 / 966 | 49% | 1.60 | 256 / 527 |
uterus | 99% | 1378.46 | 168 / 170 | 22% | 1.53 | 99 / 459 |
bladder | 86% | 720.38 | 18 / 21 | 25% | 0.76 | 127 / 504 |
stomach | 49% | 476.64 | 175 / 359 | 60% | 2.26 | 171 / 286 |
blood vessel | 100% | 1629.94 | 1332 / 1335 | 0% | 0 | 0 / 0 |
breast | 42% | 123.42 | 195 / 459 | 56% | 1.91 | 631 / 1118 |
lung | 47% | 146.81 | 273 / 578 | 49% | 2.43 | 571 / 1155 |
pancreas | 11% | 27.41 | 37 / 328 | 78% | 2.97 | 138 / 178 |
ovary | 49% | 198.33 | 89 / 180 | 39% | 1.13 | 169 / 430 |
heart | 89% | 558.03 | 762 / 861 | 0% | 0 | 0 / 0 |
skin | 57% | 187.37 | 1036 / 1809 | 23% | 0.75 | 108 / 472 |
adrenal gland | 8% | 26.40 | 21 / 258 | 68% | 7.25 | 156 / 230 |
kidney | 16% | 36.91 | 14 / 89 | 43% | 1.13 | 388 / 901 |
adipose | 41% | 136.51 | 499 / 1204 | 0% | 0 | 0 / 0 |
spleen | 38% | 96.33 | 92 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 38% | 2.16 | 17 / 45 |
muscle | 22% | 56.48 | 176 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 16% | 0.28 | 13 / 80 |
peripheral blood | 11% | 26.18 | 102 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.15 | 3 / 29 |
liver | 0% | 0 | 0 / 226 | 4% | 0.20 | 15 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007155 | Biological process | cell adhesion |
GO_0007399 | Biological process | nervous system development |
GO_0014069 | Cellular component | postsynaptic density |
GO_0043005 | Cellular component | neuron projection |
GO_0045211 | Cellular component | postsynaptic membrane |
Gene name | IGSF9B |
Protein name | Protein turtle homolog B (Immunoglobulin superfamily member 9B) (IgSF9B) Immunoglobulin superfamily member 9B |
Synonyms | KIAA1030 |
Description | FUNCTION: Transmembrane protein which is abundantly expressed in interneurons, where it may regulate inhibitory synapse development. May mediate homophilic cell adhesion. . |
Accessions | Q9UPX0 ENST00000533871.8 [Q9UPX0-2] H0YDP1 ENST00000321016.12 [Q9UPX0-1] E9PRP3 ENST00000533160.1 ENST00000526663.1 |