Insufficient scRNA-seq data for expression of HMGB1P1 at single-cell level.
Insufficient scRNA-seq data for expression of HMGB1P1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 92% | 13.59 | 2435 / 2642 | 95% | 4.99 | 668 / 705 |
intestine | 96% | 22.83 | 925 / 966 | 77% | 2.28 | 405 / 527 |
esophagus | 84% | 12.15 | 1207 / 1445 | 81% | 1.89 | 149 / 183 |
uterus | 94% | 13.68 | 160 / 170 | 70% | 3.18 | 322 / 459 |
thymus | 86% | 10.07 | 561 / 653 | 74% | 2.33 | 445 / 605 |
ovary | 79% | 7.27 | 142 / 180 | 80% | 2.66 | 346 / 430 |
bladder | 90% | 9.90 | 19 / 21 | 66% | 2.56 | 334 / 504 |
stomach | 66% | 4.94 | 236 / 359 | 84% | 2.64 | 241 / 286 |
prostate | 88% | 12.76 | 215 / 245 | 59% | 1.08 | 296 / 502 |
lung | 77% | 6.31 | 447 / 578 | 68% | 2.84 | 787 / 1155 |
breast | 76% | 5.85 | 349 / 459 | 53% | 1.86 | 596 / 1118 |
pancreas | 47% | 2.94 | 154 / 328 | 63% | 1.39 | 113 / 178 |
skin | 59% | 3.99 | 1075 / 1809 | 50% | 0.99 | 238 / 472 |
kidney | 64% | 5.03 | 57 / 89 | 43% | 0.88 | 384 / 901 |
spleen | 98% | 27.19 | 235 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 6.14 | 28 / 29 |
adrenal gland | 71% | 4.91 | 182 / 258 | 25% | 0.61 | 58 / 230 |
liver | 60% | 3.65 | 135 / 226 | 23% | 0.46 | 92 / 406 |
adipose | 78% | 5.81 | 943 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 77% | 6.02 | 1033 / 1335 | 0% | 0 | 0 / 0 |
heart | 75% | 7.12 | 642 / 861 | 0% | 0 | 0 / 0 |
muscle | 65% | 4.11 | 523 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 60% | 0.89 | 27 / 45 |
peripheral blood | 52% | 11.42 | 487 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 30% | 0.51 | 24 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005694 | Cellular component | chromosome |
GO_0005634 | Cellular component | nucleus |
GO_0008301 | Molecular function | DNA binding, bending |
Gene name | HMGB1P1 |
Protein name | Putative high mobility group protein B1-like 1 (High mobility group protein B1 pseudogene 1) (Putative high mobility group protein 1-like 1) (HMG-1L1) |
Synonyms | HMG1L1 HMGB1L1 |
Description | FUNCTION: Binds preferentially single-stranded DNA and unwinds double-stranded DNA. . |
Accessions | ENST00000522557.2 B2RPK0 |