Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 6 studies | 37% ± 15% | |
oligodendrocyte | 6 studies | 31% ± 9% | |
endothelial cell | 5 studies | 18% ± 5% | |
macrophage | 5 studies | 22% ± 7% | |
ciliated cell | 4 studies | 21% ± 2% | |
glutamatergic neuron | 4 studies | 35% ± 13% | |
microglial cell | 4 studies | 27% ± 7% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 9% | |
epithelial cell | 3 studies | 21% ± 2% | |
fibroblast | 3 studies | 21% ± 7% | |
Mueller cell | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 39% ± 6% | |
type I pneumocyte | 3 studies | 21% ± 4% | |
adipocyte | 3 studies | 26% ± 6% | |
neuron | 3 studies | 26% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 35% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1915.53 | 1445 / 1445 | 100% | 8.54 | 183 / 183 |
brain | 100% | 1299.19 | 2637 / 2642 | 100% | 14.81 | 703 / 705 |
lung | 100% | 2101.21 | 578 / 578 | 99% | 8.33 | 1147 / 1155 |
breast | 100% | 1717.15 | 459 / 459 | 99% | 9.34 | 1102 / 1118 |
skin | 100% | 1740.62 | 1805 / 1809 | 98% | 10.28 | 461 / 472 |
stomach | 100% | 1355.81 | 359 / 359 | 97% | 6.53 | 276 / 286 |
intestine | 100% | 2142.54 | 966 / 966 | 96% | 6.33 | 505 / 527 |
prostate | 100% | 1300.91 | 245 / 245 | 95% | 6.47 | 478 / 502 |
uterus | 100% | 1702.41 | 170 / 170 | 95% | 6.83 | 437 / 459 |
pancreas | 99% | 860.10 | 324 / 328 | 96% | 5.94 | 170 / 178 |
bladder | 100% | 2027.67 | 21 / 21 | 93% | 5.45 | 468 / 504 |
thymus | 100% | 1628.31 | 653 / 653 | 91% | 5.41 | 553 / 605 |
ovary | 100% | 1409.43 | 180 / 180 | 89% | 4.09 | 383 / 430 |
kidney | 100% | 1129.43 | 89 / 89 | 87% | 4.31 | 784 / 901 |
adrenal gland | 100% | 2393.24 | 258 / 258 | 84% | 3.97 | 194 / 230 |
liver | 100% | 1093.62 | 226 / 226 | 75% | 3.11 | 303 / 406 |
adipose | 100% | 2046.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2131.93 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1649.94 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 1274.29 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1650.84 | 838 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 88% | 9.59 | 70 / 80 |
tonsil | 0% | 0 | 0 / 0 | 87% | 5.38 | 39 / 45 |
lymph node | 0% | 0 | 0 / 0 | 66% | 2.58 | 19 / 29 |
peripheral blood | 63% | 430.68 | 584 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042147 | Biological process | retrograde transport, endosome to Golgi |
GO_0008104 | Biological process | protein localization |
GO_0006897 | Biological process | endocytosis |
GO_0005829 | Cellular component | cytosol |
GO_0030139 | Cellular component | endocytic vesicle |
Gene name | HEATR5A |
Protein name | HEAT repeat-containing protein 5A HEAT repeat containing 5A |
Synonyms | C14orf125 KIAA1316 |
Description | |
Accessions | F5H619 H0YHS5 Q86XA9 H7C5W6 H0YIW3 ENST00000550819.1 ENST00000382464.6 [Q86XA9-3] F8VQQ6 ENST00000538864.6 ENST00000549719.1 H0YHE0 ENST00000550366.5 ENST00000549184.1 ENST00000543095.7 |