Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 33% ± 23% | |
type I pneumocyte | 8 studies | 37% ± 12% | |
basal cell | 8 studies | 31% ± 15% | |
oligodendrocyte precursor cell | 8 studies | 40% ± 19% | |
endothelial cell | 7 studies | 34% ± 17% | |
GABAergic neuron | 6 studies | 36% ± 20% | |
astrocyte | 6 studies | 33% ± 16% | |
T cell | 5 studies | 19% ± 2% | |
amacrine cell | 5 studies | 25% ± 10% | |
interneuron | 5 studies | 47% ± 25% | |
epithelial cell | 5 studies | 33% ± 19% | |
neuron | 4 studies | 27% ± 4% | |
granule cell | 4 studies | 33% ± 7% | |
ciliated cell | 4 studies | 22% ± 6% | |
lymphocyte | 4 studies | 33% ± 9% | |
respiratory goblet cell | 4 studies | 24% ± 12% | |
oligodendrocyte | 4 studies | 26% ± 10% | |
secretory cell | 3 studies | 23% ± 5% | |
CD4-positive, alpha-beta T cell | 3 studies | 18% ± 0% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 18% ± 1% | |
progenitor cell | 3 studies | 23% ± 4% | |
retina horizontal cell | 3 studies | 19% ± 3% | |
retinal ganglion cell | 3 studies | 23% ± 2% | |
fibroblast | 3 studies | 24% ± 9% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
transit amplifying cell | 3 studies | 33% ± 23% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 31% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 26632.08 | 653 / 653 | 97% | 50.29 | 587 / 605 |
esophagus | 100% | 7457.90 | 1439 / 1445 | 95% | 18.53 | 174 / 183 |
uterus | 100% | 13056.93 | 170 / 170 | 93% | 25.59 | 426 / 459 |
pancreas | 99% | 6375.03 | 324 / 328 | 88% | 12.10 | 156 / 178 |
brain | 93% | 9363.45 | 2447 / 2642 | 90% | 21.32 | 633 / 705 |
bladder | 100% | 9460.33 | 21 / 21 | 77% | 17.96 | 387 / 504 |
lung | 99% | 6911.73 | 574 / 578 | 77% | 15.21 | 894 / 1155 |
ovary | 100% | 18010.22 | 180 / 180 | 75% | 12.18 | 323 / 430 |
adrenal gland | 98% | 5074.21 | 254 / 258 | 69% | 9.71 | 159 / 230 |
prostate | 100% | 11740.83 | 245 / 245 | 64% | 8.46 | 321 / 502 |
stomach | 100% | 6708.27 | 358 / 359 | 64% | 7.56 | 183 / 286 |
breast | 100% | 10289.45 | 458 / 459 | 60% | 7.67 | 669 / 1118 |
skin | 99% | 8073.38 | 1799 / 1809 | 53% | 8.17 | 252 / 472 |
intestine | 100% | 8869.21 | 965 / 966 | 52% | 6.41 | 275 / 527 |
kidney | 97% | 5465.48 | 86 / 89 | 55% | 10.57 | 496 / 901 |
spleen | 100% | 11416.55 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 21.05 | 1 / 1 |
adipose | 99% | 6240.53 | 1195 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 94% | 5978.88 | 1258 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 18.09 | 24 / 29 |
heart | 77% | 2696.17 | 662 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 13.00 | 33 / 45 |
liver | 29% | 818.56 | 66 / 226 | 23% | 2.05 | 94 / 406 |
eye | 0% | 0 | 0 / 0 | 40% | 5.92 | 32 / 80 |
peripheral blood | 30% | 4052.91 | 282 / 929 | 0% | 0 | 0 / 0 |
muscle | 29% | 795.80 | 236 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007030 | Biological process | Golgi organization |
GO_0005801 | Cellular component | cis-Golgi network |
GO_0000137 | Cellular component | Golgi cis cisterna |
GO_0005829 | Cellular component | cytosol |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0005794 | Cellular component | Golgi apparatus |
Gene name | GOLGA8A |
Protein name | Golgin subfamily A member 8A (88 kDa Golgi matrix protein) (GM88) (GM88 autoantigen) GOLGA8A protein Golgin A8 family member A |
Synonyms | KIAA0855 |
Description | FUNCTION: May be involved in maintaining Golgi structure. . |
Accessions | A1A4C0 ENST00000699472.1 ENST00000359187.5 [A7E2F4-3] A0A8V8TPN8 A7E2F4 |