II. Expression across tissues
sc-RNAseq data
Insufficient scRNA-seq data for expression of GGTA1 at tissue level.
Tissue | GTEx Coverage  | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 81% | 935.66 | 2139 / 2642 | 99% | 30.15 | 696 / 705 |
| breast | 95% | 1030.31 | 437 / 459 | 84% | 5.57 | 938 / 1118 |
| thymus | 87% | 491.36 | 566 / 653 | 87% | 4.76 | 528 / 605 |
| lung | 90% | 577.31 | 522 / 578 | 72% | 4.01 | 829 / 1155 |
| prostate | 68% | 336.84 | 166 / 245 | 73% | 2.97 | 367 / 502 |
| adrenal gland | 56% | 264.39 | 144 / 258 | 75% | 4.64 | 173 / 230 |
| skin | 68% | 386.87 | 1222 / 1809 | 63% | 3.92 | 295 / 472 |
| kidney | 34% | 138.85 | 30 / 89 | 85% | 10.43 | 766 / 901 |
| uterus | 66% | 298.17 | 113 / 170 | 52% | 3.05 | 237 / 459 |
| esophagus | 87% | 896.90 | 1257 / 1445 | 23% | 0.92 | 42 / 183 |
| intestine | 74% | 406.29 | 713 / 966 | 26% | 1.22 | 138 / 527 |
| blood vessel | 100% | 4735.54 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 98% | 1379.52 | 237 / 241 | 0% | 0 | 0 / 0 |
| adipose | 97% | 1249.48 | 1171 / 1204 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 93% | 8.87 | 27 / 29 |
| heart | 89% | 974.42 | 767 / 861 | 0% | 0 | 0 / 0 |
| ovary | 22% | 130.57 | 40 / 180 | 62% | 2.98 | 266 / 430 |
| bladder | 48% | 238.00 | 10 / 21 | 35% | 2.09 | 174 / 504 |
| stomach | 45% | 256.25 | 160 / 359 | 36% | 1.55 | 104 / 286 |
| liver | 7% | 22.26 | 15 / 226 | 73% | 3.55 | 296 / 406 |
| pancreas | 3% | 10.39 | 10 / 328 | 69% | 4.15 | 122 / 178 |
| tonsil | 0% | 0 | 0 / 0 | 67% | 3.24 | 30 / 45 |
| peripheral blood | 32% | 151.71 | 296 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 28% | 1.19 | 22 / 80 |
| muscle | 17% | 57.48 | 138 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |