Insufficient scRNA-seq data for expression of GCNT4 at single-cell level.
Insufficient scRNA-seq data for expression of GCNT4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 407.15 | 328 / 328 | 95% | 6.26 | 169 / 178 |
thymus | 98% | 174.80 | 640 / 653 | 80% | 4.59 | 486 / 605 |
kidney | 100% | 359.79 | 89 / 89 | 75% | 3.61 | 679 / 901 |
esophagus | 100% | 420.19 | 1442 / 1445 | 73% | 2.86 | 133 / 183 |
bladder | 100% | 948.43 | 21 / 21 | 72% | 6.96 | 364 / 504 |
lung | 99% | 278.51 | 574 / 578 | 66% | 2.21 | 767 / 1155 |
uterus | 100% | 311.36 | 170 / 170 | 63% | 2.65 | 291 / 459 |
breast | 99% | 239.94 | 453 / 459 | 63% | 2.55 | 709 / 1118 |
liver | 77% | 100.89 | 175 / 226 | 75% | 4.04 | 305 / 406 |
stomach | 100% | 1373.09 | 359 / 359 | 50% | 2.40 | 143 / 286 |
prostate | 99% | 332.91 | 243 / 245 | 44% | 0.79 | 221 / 502 |
intestine | 99% | 464.63 | 958 / 966 | 40% | 1.50 | 209 / 527 |
skin | 99% | 363.82 | 1790 / 1809 | 24% | 0.73 | 115 / 472 |
adrenal gland | 96% | 172.02 | 247 / 258 | 27% | 0.91 | 61 / 230 |
ovary | 97% | 222.74 | 175 / 180 | 14% | 0.38 | 62 / 430 |
brain | 66% | 231.40 | 1747 / 2642 | 42% | 0.89 | 298 / 705 |
blood vessel | 100% | 424.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 243.81 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.32 | 1 / 1 |
adipose | 96% | 175.36 | 1159 / 1204 | 0% | 0 | 0 / 0 |
muscle | 89% | 143.88 | 713 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 1.94 | 33 / 45 |
heart | 48% | 47.88 | 411 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 1.06 | 12 / 29 |
peripheral blood | 31% | 47.22 | 290 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 4% | 0.05 | 3 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001780 | Biological process | neutrophil homeostasis |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0016266 | Biological process | O-glycan processing |
GO_0060993 | Biological process | kidney morphogenesis |
GO_0002121 | Biological process | inter-male aggressive behavior |
GO_0042403 | Biological process | thyroid hormone metabolic process |
GO_0048729 | Biological process | tissue morphogenesis |
GO_0006493 | Biological process | protein O-linked glycosylation |
GO_0000139 | Cellular component | Golgi membrane |
GO_0008375 | Molecular function | acetylglucosaminyltransferase activity |
GO_0003829 | Molecular function | beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity |
GO_0008109 | Molecular function | N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity |
Gene name | GCNT4 |
Protein name | Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 (EC 2.4.1.102) (Core 2-branching enzyme 3) (Core2-GlcNAc-transferase 3) (C2GnT3) |
Synonyms | |
Description | FUNCTION: Glycosyltransferase that mediates core 2 O-glycan branching, an important step in mucin-type biosynthesis. Does not have core 4 O-glycan or I-branching enzyme activity. . |
Accessions | ENST00000652361.2 Q9P109 ENST00000322348.5 |