GCAT | OmnibusX

Name	Number of supported studies	Average coverage
epithelial cell	4 studies	22% ± 9%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of GCAT at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1199.97	2639 / 2642	100%	42.07	704 / 705
prostate	100%	1644.92	245 / 245	99%	101.23	499 / 502
skin	100%	768.90	1804 / 1809	98%	52.38	464 / 472
thymus	100%	1203.74	653 / 653	98%	32.75	590 / 605
bladder	100%	487.29	21 / 21	95%	29.43	478 / 504
breast	99%	465.59	454 / 459	96%	29.08	1068 / 1118
pancreas	100%	2776.87	328 / 328	94%	19.41	168 / 178
liver	100%	1790.96	226 / 226	94%	60.30	382 / 406
ovary	98%	616.30	177 / 180	93%	24.04	402 / 430
intestine	98%	451.71	944 / 966	91%	30.92	482 / 527
stomach	100%	656.02	359 / 359	88%	24.08	251 / 286
uterus	96%	449.21	163 / 170	90%	28.53	412 / 459
adrenal gland	100%	992.50	258 / 258	80%	18.21	184 / 230
esophagus	100%	702.15	1441 / 1445	80%	14.98	146 / 183
lung	84%	391.76	488 / 578	90%	27.36	1042 / 1155
kidney	100%	697.39	89 / 89	73%	15.46	658 / 901
eye	0%	0	0 / 0	100%	59.52	80 / 80
ureter	0%	0	0 / 0	100%	34.98	1 / 1
muscle	99%	669.00	795 / 803	0%	0	0 / 0
heart	98%	1255.69	843 / 861	0%	0	0 / 0
blood vessel	97%	397.98	1289 / 1335	0%	0	0 / 0
adipose	96%	401.61	1156 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	93%	22.92	42 / 45
lymph node	0%	0	0 / 0	93%	30.43	27 / 29
peripheral blood	36%	182.03	338 / 929	0%	0	0 / 0
spleen	14%	28.00	33 / 241	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0009058	Biological process	biosynthetic process
GO_0006567	Biological process	threonine catabolic process
GO_0006520	Biological process	amino acid metabolic process
GO_0016607	Cellular component	nuclear speck
GO_0005654	Cellular component	nucleoplasm
GO_0005743	Cellular component	mitochondrial inner membrane
GO_0005739	Cellular component	mitochondrion
GO_0005634	Cellular component	nucleus
GO_0008890	Molecular function	glycine C-acetyltransferase activity
GO_0030170	Molecular function	pyridoxal phosphate binding

Gene name	GCAT
Protein name	Glycine C-acetyltransferase 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial (AKB ligase) (EC 2.3.1.29) (Aminoacetone synthase) (Glycine acetyltransferase)
Synonyms	KBL
Description	FUNCTION: Pyridoxal phosphate (PLP) dependent enzyme, which catalyzes the cleavage of 2-amino-3-oxobutanoate to glycine and acetyl-CoA. .
Accessions	O75600 H7BZ75 ENST00000451984.1 C9IZC9 ENST00000445195.5 F2Z340 ENST00000426858.1 ENST00000248924.11 [O75600-1] ENST00000323205.10 [O75600-2]

GCAT report