Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 5 studies | 23% ± 5% | |
endothelial cell | 4 studies | 29% ± 10% | |
retinal bipolar neuron | 3 studies | 17% ± 1% | |
GABAergic neuron | 3 studies | 30% ± 10% | |
astrocyte | 3 studies | 28% ± 3% | |
glutamatergic neuron | 3 studies | 38% ± 15% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 3% | |
enteroendocrine cell | 3 studies | 17% ± 3% | |
goblet cell | 3 studies | 16% ± 0% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 25% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7569.42 | 1445 / 1445 | 100% | 34.49 | 183 / 183 |
intestine | 100% | 11624.40 | 966 / 966 | 100% | 51.51 | 527 / 527 |
prostate | 100% | 9097.46 | 245 / 245 | 100% | 56.64 | 502 / 502 |
stomach | 100% | 7299.99 | 359 / 359 | 100% | 43.88 | 286 / 286 |
thymus | 100% | 10203.84 | 653 / 653 | 100% | 47.26 | 604 / 605 |
kidney | 100% | 10156.74 | 89 / 89 | 100% | 55.84 | 899 / 901 |
lung | 100% | 8230.53 | 578 / 578 | 100% | 34.59 | 1152 / 1155 |
breast | 100% | 6262.10 | 459 / 459 | 100% | 38.54 | 1114 / 1118 |
bladder | 100% | 7823.19 | 21 / 21 | 100% | 37.77 | 502 / 504 |
pancreas | 100% | 4438.99 | 328 / 328 | 99% | 47.01 | 177 / 178 |
brain | 99% | 7022.78 | 2626 / 2642 | 100% | 59.37 | 705 / 705 |
skin | 100% | 4748.93 | 1809 / 1809 | 99% | 40.38 | 469 / 472 |
uterus | 100% | 7688.26 | 170 / 170 | 99% | 37.11 | 455 / 459 |
ovary | 100% | 5725.77 | 180 / 180 | 99% | 38.60 | 426 / 430 |
liver | 100% | 4679.27 | 226 / 226 | 99% | 29.75 | 401 / 406 |
adrenal gland | 100% | 6039.59 | 258 / 258 | 98% | 51.17 | 226 / 230 |
adipose | 100% | 5906.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 45.03 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 35.77 | 29 / 29 |
muscle | 100% | 6956.20 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 8049.69 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.38 | 1 / 1 |
blood vessel | 100% | 6695.05 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 7636.56 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 3727.27 | 897 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097035 | Biological process | regulation of membrane lipid distribution |
GO_0008206 | Biological process | bile acid metabolic process |
GO_0030833 | Biological process | regulation of actin filament polymerization |
GO_0005975 | Biological process | carbohydrate metabolic process |
GO_0008203 | Biological process | cholesterol metabolic process |
GO_0016139 | Biological process | glycoside catabolic process |
GO_0046479 | Biological process | glycosphingolipid catabolic process |
GO_0021954 | Biological process | central nervous system neuron development |
GO_0007417 | Biological process | central nervous system development |
GO_0030259 | Biological process | lipid glycosylation |
GO_0031113 | Biological process | regulation of microtubule polymerization |
GO_0006680 | Biological process | glucosylceramide catabolic process |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005790 | Cellular component | smooth endoplasmic reticulum |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0004336 | Molecular function | galactosylceramidase activity |
GO_0008422 | Molecular function | beta-glucosidase activity |
GO_0050295 | Molecular function | steryl-beta-glucosidase activity |
GO_0046527 | Molecular function | glucosyltransferase activity |
GO_0004348 | Molecular function | glucosylceramidase activity |
Gene name | GBA2 |
Protein name | Glucosylceramidase beta 2 Non-lysosomal glucosylceramidase (NLGase) (EC 3.2.1.45) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2) (Bile acid beta-glucosidase GBA2) (Bile acid glucosyl transferase GBA2) (Cholesterol glucosyltransferase GBA2) (EC 2.4.1.-) (Cholesteryl-beta-glucosidase GBA2) (EC 3.2.1.-) (Glucosylceramidase 2) (Non-lysosomal cholesterol glycosyltransferase) (Non-lysosomal galactosylceramidase) (EC 3.2.1.46) (Non-lysosomal glycosylceramidase) |
Synonyms | AD035 KIAA1605 SPG46 |
Description | FUNCTION: Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramides/GlcCers (such as beta-D-glucosyl-(1<->1')-N-acylsphing-4-enine) to free glucose and ceramides (such as N-acylsphing-4-enine) . GlcCers are membrane glycosphingolipids that have a wide intracellular distribution (By similarity). They are the main precursors of more complex glycosphingolipids that play a role in cellular growth, differentiation, adhesion, signaling, cytoskeletal dynamics and membrane properties (By similarity). Involved in the transglucosylation of cholesterol, transfers glucose from GlcCer to cholesterol, thereby modifying its water solubility and biological properties . Under specific conditions, may catalyze the reverse reaction, transferring glucose from cholesteryl-3-beta-D-glucoside to ceramide (such as N-acylsphing-4-enine) (Probable). May play a role in the metabolism of bile acids . Able to hydrolyze bile acid 3-O-glucosides as well as to produce bile acid-glucose conjugates thanks to a bile acid glucosyl transferase activity . Catalyzes the hydrolysis of galactosylceramides/GalCers (such as beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine), as well as the galactosyl transfer between GalCers and cholesterol in vitro with lower activity compared with their activity against GlcCers . . |
Accessions | ENST00000378103.7 [Q9HCG7-1] A0A0A0MRV1 ENST00000378094.4 [Q9HCG7-2] ENST00000378088.1 Q9HCG7 |