Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 14 studies | 39% ± 15% | |
glutamatergic neuron | 13 studies | 43% ± 22% | |
astrocyte | 12 studies | 41% ± 16% | |
GABAergic neuron | 10 studies | 53% ± 27% | |
microglial cell | 10 studies | 30% ± 9% | |
oligodendrocyte precursor cell | 8 studies | 24% ± 10% | |
neuron | 6 studies | 39% ± 12% | |
interneuron | 6 studies | 59% ± 24% | |
endothelial cell | 5 studies | 34% ± 17% | |
macrophage | 5 studies | 29% ± 10% | |
cardiac muscle cell | 5 studies | 33% ± 10% | |
granule cell | 4 studies | 47% ± 7% | |
smooth muscle cell | 4 studies | 30% ± 9% | |
GABAergic interneuron | 3 studies | 55% ± 3% | |
epithelial cell | 3 studies | 22% ± 5% | |
fibroblast | 3 studies | 20% ± 2% | |
pericyte | 3 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1324.38 | 245 / 245 | 100% | 7.94 | 502 / 502 |
brain | 100% | 2530.67 | 2636 / 2642 | 100% | 6.54 | 702 / 705 |
adrenal gland | 99% | 1168.51 | 256 / 258 | 93% | 9.75 | 215 / 230 |
breast | 94% | 685.64 | 432 / 459 | 92% | 3.89 | 1031 / 1118 |
thymus | 100% | 981.65 | 650 / 653 | 76% | 1.90 | 462 / 605 |
kidney | 83% | 388.15 | 74 / 89 | 92% | 2.76 | 833 / 901 |
ovary | 100% | 1035.24 | 180 / 180 | 69% | 1.61 | 298 / 430 |
bladder | 100% | 1257.95 | 21 / 21 | 65% | 1.46 | 330 / 504 |
esophagus | 89% | 588.49 | 1279 / 1445 | 73% | 1.42 | 134 / 183 |
uterus | 100% | 1891.73 | 170 / 170 | 59% | 1.44 | 269 / 459 |
intestine | 89% | 592.83 | 855 / 966 | 66% | 1.24 | 346 / 527 |
lung | 81% | 357.79 | 469 / 578 | 65% | 1.36 | 746 / 1155 |
skin | 72% | 503.57 | 1310 / 1809 | 69% | 2.44 | 327 / 472 |
stomach | 78% | 403.76 | 280 / 359 | 64% | 1.23 | 182 / 286 |
blood vessel | 100% | 2390.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 95% | 777.91 | 1149 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 3.32 | 76 / 80 |
pancreas | 26% | 81.90 | 85 / 328 | 69% | 1.30 | 122 / 178 |
heart | 92% | 731.77 | 795 / 861 | 0% | 0 | 0 / 0 |
spleen | 88% | 361.54 | 211 / 241 | 0% | 0 | 0 / 0 |
liver | 49% | 166.06 | 111 / 226 | 34% | 0.67 | 138 / 406 |
tonsil | 0% | 0 | 0 / 0 | 62% | 0.98 | 28 / 45 |
muscle | 45% | 152.92 | 361 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 0.49 | 9 / 29 |
peripheral blood | 12% | 48.51 | 108 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0005737 | Cellular component | cytoplasm |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | GARNL3 |
Protein name | GTPase activating Rap/RanGAP domain like 3 GTPase-activating Rap/Ran-GAP domain-like protein 3 |
Synonyms | |
Description | |
Accessions | S4R3P7 ENST00000425970.5 ENST00000373386.6 ENST00000373387.9 [Q5VVW2-1] ENST00000460176.6 ENST00000441134.5 F8WB68 A0A0C4DFW0 C9JFS0 ENST00000439286.5 C9J9U0 C9J8L5 ENST00000435213.6 [Q5VVW2-5] ENST00000429629.6 ENST00000453030.5 ENST00000444677.5 Q5JS19 ENST00000446764.5 Q5VVW2 F2Z2Q8 |