Insufficient scRNA-seq data for expression of GARIN2 at single-cell level.
Insufficient scRNA-seq data for expression of GARIN2 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 92% | 9.82 | 1332 / 1445 | 13% | 0.22 | 23 / 183 |
thymus | 99% | 17.53 | 648 / 653 | 1% | 0.03 | 7 / 605 |
ovary | 94% | 9.87 | 170 / 180 | 3% | 0.05 | 15 / 430 |
lung | 93% | 10.35 | 540 / 578 | 4% | 0.06 | 42 / 1155 |
kidney | 96% | 10.92 | 85 / 89 | 1% | 0.02 | 9 / 901 |
uterus | 96% | 13.21 | 164 / 170 | 0% | 0 | 0 / 459 |
bladder | 95% | 10.76 | 20 / 21 | 1% | 0.02 | 6 / 504 |
prostate | 96% | 14.35 | 235 / 245 | 0% | 0 | 0 / 502 |
liver | 95% | 13.19 | 215 / 226 | 0% | 0.00 | 1 / 406 |
intestine | 93% | 10.42 | 897 / 966 | 2% | 0.03 | 12 / 527 |
spleen | 95% | 11.02 | 229 / 241 | 0% | 0 | 0 / 0 |
breast | 95% | 11.78 | 434 / 459 | 0% | 0.01 | 5 / 1118 |
stomach | 88% | 7.97 | 315 / 359 | 5% | 0.07 | 14 / 286 |
blood vessel | 92% | 9.71 | 1231 / 1335 | 0% | 0 | 0 / 0 |
pancreas | 91% | 9.76 | 300 / 328 | 1% | 0.01 | 1 / 178 |
brain | 91% | 11.58 | 2408 / 2642 | 0% | 0.01 | 2 / 705 |
adipose | 91% | 9.69 | 1096 / 1204 | 0% | 0 | 0 / 0 |
skin | 89% | 9.29 | 1610 / 1809 | 2% | 0.06 | 8 / 472 |
adrenal gland | 86% | 8.69 | 223 / 258 | 0% | 0 | 0 / 230 |
heart | 75% | 5.36 | 645 / 861 | 0% | 0 | 0 / 0 |
muscle | 65% | 4.65 | 524 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 61% | 6.42 | 565 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030317 | Biological process | flagellated sperm motility |
GO_0097225 | Cellular component | sperm midpiece |
Gene name | GARIN2 |
Protein name | Golgi associated RAB2 interactor family member 2 (HCG2029558, isoform CRA_b) Golgi associated RAB2 interactor family member 2 Golgi-associated RAB2 interactor protein 2 |
Synonyms | FAM71D C14orf54 hCG_2029558 |
Description | FUNCTION: Seems to play a role in sperm motility. . |
Accessions | G3V4K8 Q8N9W8 ENST00000696961.1 ENST00000530728.5 A0A8V8TKV5 ENST00000696960.1 ENST00000556046.5 ENST00000696955.1 A0A8V8TLQ8 A0A8V8TLY4 H0YJQ5 ENST00000696959.1 A0A8V8TLY9 ENST00000696957.1 ENST00000696956.1 E9PPX0 A0A8V8TKJ2 H3BMS9 ENST00000524914.5 ENST00000612183.4 [Q8N9W8-1] E9PM27 ENST00000556117.1 ENST00000524532.5 A0A8V8TKH0 H0YJ27 ENST00000534174.5 [Q8N9W8-2] ENST00000696958.1 ENST00000557671.2 |