Insufficient scRNA-seq data for expression of GARIN1A at single-cell level.
Insufficient scRNA-seq data for expression of GARIN1A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 109.94 | 2536 / 2642 | 88% | 2.62 | 623 / 705 |
adrenal gland | 100% | 159.58 | 257 / 258 | 58% | 1.21 | 133 / 230 |
ovary | 100% | 109.79 | 180 / 180 | 49% | 1.21 | 212 / 430 |
pancreas | 96% | 60.36 | 316 / 328 | 47% | 0.93 | 83 / 178 |
breast | 100% | 124.62 | 458 / 459 | 40% | 0.83 | 450 / 1118 |
esophagus | 99% | 90.36 | 1424 / 1445 | 40% | 0.81 | 74 / 183 |
prostate | 100% | 134.00 | 245 / 245 | 38% | 0.66 | 193 / 502 |
kidney | 100% | 134.44 | 89 / 89 | 34% | 0.67 | 305 / 901 |
lung | 97% | 75.23 | 563 / 578 | 34% | 0.66 | 397 / 1155 |
bladder | 100% | 88.43 | 21 / 21 | 25% | 0.52 | 124 / 504 |
uterus | 98% | 82.12 | 166 / 170 | 26% | 0.45 | 121 / 459 |
thymus | 100% | 137.55 | 652 / 653 | 23% | 0.39 | 141 / 605 |
skin | 97% | 67.65 | 1752 / 1809 | 24% | 0.46 | 111 / 472 |
stomach | 98% | 77.01 | 351 / 359 | 19% | 0.30 | 53 / 286 |
intestine | 100% | 86.72 | 963 / 966 | 16% | 0.28 | 86 / 527 |
spleen | 100% | 159.93 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.25 | 1 / 1 |
adipose | 100% | 120.93 | 1200 / 1204 | 0% | 0 | 0 / 0 |
liver | 85% | 46.57 | 192 / 226 | 12% | 0.24 | 47 / 406 |
blood vessel | 96% | 72.26 | 1282 / 1335 | 0% | 0 | 0 / 0 |
heart | 95% | 114.99 | 817 / 861 | 0% | 0 | 0 / 0 |
muscle | 91% | 62.85 | 734 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 76% | 83.09 | 704 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 21% | 0.33 | 6 / 29 |
eye | 0% | 0 | 0 / 0 | 14% | 0.23 | 11 / 80 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.12 | 3 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001675 | Biological process | acrosome assembly |
GO_0005794 | Cellular component | Golgi apparatus |
Gene name | GARIN1A |
Protein name | Golgi-associated RAB2 interactor protein 1A Golgi associated RAB2 interactor 1A |
Synonyms | FAM71F2 FAM137B |
Description | FUNCTION: RAB2B effector protein required for accurate acrosome formation and normal male fertility. . |
Accessions | ENST00000684390.1 C9K0C0 ENST00000683523.1 A0A804HJ82 A0A804HKS5 A0A804HJA3 ENST00000682361.1 ENST00000641987.1 [Q6NXP2-2] Q6NXP2 ENST00000684742.1 ENST00000682356.1 [Q6NXP2-2] ENST00000684498.1 A0A804HLI1 ENST00000477515.3 ENST00000641888.1 [Q6NXP2-2] ENST00000641605.1 [Q6NXP2-1] A0A804HIQ6 |