I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 39% ± 18% | |
| GABAergic neuron | 4 studies | 34% ± 16% | |
| interneuron | 3 studies | 35% ± 18% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 4 studies | 39% ± 18% | |
| GABAergic neuron | 4 studies | 34% ± 16% | |
| interneuron | 3 studies | 35% ± 18% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 3 studies | 30% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 98% | 3575.57 | 2586 / 2642 | 98% | 12.57 | 691 / 705 |
| adrenal gland | 100% | 1851.35 | 257 / 258 | 90% | 22.82 | 207 / 230 |
| breast | 99% | 2723.74 | 453 / 459 | 72% | 7.67 | 803 / 1118 |
| prostate | 93% | 1103.33 | 227 / 245 | 69% | 2.65 | 344 / 502 |
| kidney | 99% | 1618.33 | 88 / 89 | 55% | 4.12 | 492 / 901 |
| thymus | 93% | 1274.97 | 605 / 653 | 46% | 2.48 | 279 / 605 |
| uterus | 94% | 1567.62 | 159 / 170 | 26% | 2.12 | 121 / 459 |
| spleen | 100% | 3045.51 | 241 / 241 | 0% | 0 | 0 / 0 |
| heart | 100% | 4867.12 | 860 / 861 | 0% | 0 | 0 / 0 |
| adipose | 99% | 2811.30 | 1197 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 97% | 1492.69 | 1289 / 1335 | 0% | 0 | 0 / 0 |
| intestine | 79% | 1124.41 | 759 / 966 | 6% | 0.28 | 34 / 527 |
| lung | 70% | 682.00 | 406 / 578 | 11% | 0.47 | 122 / 1155 |
| skin | 65% | 1027.42 | 1173 / 1809 | 15% | 0.67 | 69 / 472 |
| esophagus | 70% | 1022.44 | 1013 / 1445 | 8% | 0.30 | 14 / 183 |
| pancreas | 32% | 226.54 | 104 / 328 | 42% | 2.06 | 75 / 178 |
| bladder | 62% | 632.33 | 13 / 21 | 7% | 0.52 | 36 / 504 |
| ovary | 43% | 369.37 | 77 / 180 | 25% | 1.25 | 109 / 430 |
| stomach | 43% | 515.68 | 153 / 359 | 14% | 0.68 | 39 / 286 |
| muscle | 34% | 264.25 | 276 / 803 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 28% | 1.03 | 8 / 29 |
| liver | 13% | 80.25 | 29 / 226 | 6% | 0.17 | 24 / 406 |
| tonsil | 0% | 0 | 0 / 0 | 11% | 0.37 | 5 / 45 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.07 | 2 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0018243 | Biological process | protein O-linked glycosylation via threonine |
| GO_0006493 | Biological process | protein O-linked glycosylation |
| GO_0018242 | Biological process | protein O-linked glycosylation via serine |
| GO_0000139 | Cellular component | Golgi membrane |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0004653 | Molecular function | polypeptide N-acetylgalactosaminyltransferase activity |
| GO_0030246 | Molecular function | carbohydrate binding |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | GALNT16 |
| Protein name | Polypeptide N-acetylgalactosaminyltransferase 16 (EC 2.4.1.41) (Polypeptide GalNAc transferase 16) (GalNAc-T16) (Polypeptide GalNAc transferase-like protein 1) (GalNAc-T-like protein 1) (pp-GaNTase-like protein 1) (Polypeptide N-acetylgalactosaminyltransferase-like protein 1) (Protein-UDP acetylgalactosaminyltransferase-like protein 1) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 1) Polypeptide N-acetylgalactosaminyltransferase (EC 2.4.1.-) (Protein-UDP acetylgalactosaminyltransferase) |
| Synonyms | KIAA1130 hCG_21969 GALNTL1 |
| Description | FUNCTION: Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. . |
| Accessions | Q68VJ8 ENST00000553471.6 [Q8N428-2] ENST00000448469.8 [Q8N428-1] Q8N428 ENST00000553669.1 [Q8N428-2] ENST00000337827.8 [Q8N428-1] |
