Insufficient scRNA-seq data for expression of FAM53A at single-cell level.
Insufficient scRNA-seq data for expression of FAM53A at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 437.53 | 653 / 653 | 94% | 2.39 | 567 / 605 |
prostate | 100% | 107.76 | 245 / 245 | 84% | 1.55 | 420 / 502 |
breast | 100% | 132.03 | 457 / 459 | 77% | 1.72 | 866 / 1118 |
ovary | 100% | 129.85 | 180 / 180 | 75% | 1.73 | 321 / 430 |
skin | 100% | 158.63 | 1807 / 1809 | 74% | 1.82 | 351 / 472 |
liver | 98% | 96.29 | 222 / 226 | 59% | 1.34 | 240 / 406 |
uterus | 100% | 128.62 | 170 / 170 | 57% | 1.40 | 261 / 459 |
intestine | 99% | 106.11 | 956 / 966 | 55% | 1.11 | 290 / 527 |
bladder | 100% | 108.86 | 21 / 21 | 52% | 1.27 | 263 / 504 |
stomach | 99% | 104.41 | 357 / 359 | 48% | 1.06 | 138 / 286 |
lung | 91% | 70.65 | 526 / 578 | 57% | 1.18 | 654 / 1155 |
pancreas | 99% | 88.56 | 325 / 328 | 34% | 0.57 | 60 / 178 |
kidney | 98% | 102.48 | 87 / 89 | 33% | 0.55 | 296 / 901 |
esophagus | 99% | 106.60 | 1431 / 1445 | 29% | 0.51 | 53 / 183 |
brain | 97% | 94.69 | 2556 / 2642 | 19% | 0.30 | 135 / 705 |
adrenal gland | 99% | 111.00 | 256 / 258 | 16% | 0.29 | 36 / 230 |
spleen | 100% | 113.14 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.15 | 1 / 1 |
adipose | 100% | 131.46 | 1198 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 104.97 | 1324 / 1335 | 0% | 0 | 0 / 0 |
muscle | 94% | 62.55 | 752 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 2.22 | 72 / 80 |
heart | 86% | 51.88 | 744 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 53% | 0.95 | 24 / 45 |
lymph node | 0% | 0 | 0 / 0 | 52% | 0.82 | 15 / 29 |
peripheral blood | 50% | 30.65 | 463 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006606 | Biological process | protein import into nucleus |
GO_0005634 | Cellular component | nucleus |
Gene name | FAM53A |
Protein name | Protein FAM53A (Dorsal neural-tube nuclear protein) Family with sequence similarity 53 member A (Family with sequence similarity 53, member A, isoform CRA_b) Family with sequence similarity 53 member A |
Synonyms | hCG_1818298 |
Description | FUNCTION: May play an important role in neural development; the dorsomedial roof of the third ventricle. . |
Accessions | C9JYQ7 H0Y9F1 ENST00000472884.6 ENST00000489029.1 ENST00000308132.11 Q6NSI3 ENST00000489363.5 ENST00000461064.5 |