Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 6 studies | 30% ± 17% | |
ciliated cell | 3 studies | 22% ± 4% | |
endothelial cell | 3 studies | 22% ± 6% | |
astrocyte | 3 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 6457.97 | 258 / 258 | 100% | 49.65 | 230 / 230 |
esophagus | 100% | 7289.58 | 1445 / 1445 | 100% | 63.98 | 183 / 183 |
ovary | 100% | 4407.54 | 180 / 180 | 100% | 67.52 | 430 / 430 |
pancreas | 100% | 3694.34 | 328 / 328 | 100% | 62.56 | 178 / 178 |
skin | 100% | 5246.80 | 1809 / 1809 | 100% | 98.85 | 472 / 472 |
thymus | 100% | 6479.01 | 653 / 653 | 100% | 62.30 | 605 / 605 |
kidney | 100% | 6219.92 | 89 / 89 | 100% | 71.18 | 897 / 901 |
prostate | 100% | 6815.54 | 245 / 245 | 99% | 73.70 | 499 / 502 |
uterus | 100% | 5094.74 | 170 / 170 | 99% | 64.37 | 456 / 459 |
intestine | 100% | 7370.21 | 966 / 966 | 99% | 71.70 | 523 / 527 |
breast | 100% | 5462.75 | 459 / 459 | 99% | 76.65 | 1108 / 1118 |
stomach | 100% | 5470.22 | 359 / 359 | 99% | 66.84 | 283 / 286 |
lung | 100% | 4408.76 | 576 / 578 | 99% | 60.80 | 1143 / 1155 |
bladder | 100% | 6844.86 | 21 / 21 | 99% | 61.21 | 497 / 504 |
liver | 100% | 3291.65 | 226 / 226 | 98% | 40.58 | 399 / 406 |
brain | 97% | 2692.33 | 2568 / 2642 | 100% | 54.93 | 705 / 705 |
adipose | 100% | 5602.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 119.33 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.21 | 29 / 29 |
muscle | 100% | 10413.46 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3649.02 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 50.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 74.96 | 1 / 1 |
blood vessel | 100% | 6431.50 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 7951.14 | 860 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 77% | 1491.93 | 719 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0009986 | Cellular component | cell surface |
GO_0070062 | Cellular component | extracellular exosome |
GO_0016020 | Cellular component | membrane |
GO_0003674 | Molecular function | molecular_function |
Gene name | FAM234A |
Protein name | Family with sequence similarity 234 member A (cDNA FLJ60496) Family with sequence similarity 234 member A Protein FAM234A (Protein ITFG3) |
Synonyms | C16orf9 ITFG3 |
Description | |
Accessions | ENST00000654053.1 [Q9H0X4-2] ENST00000438220.5 H7C3L6 Q9H0X4 ENST00000301679.7 [Q9H0X4-2] ENST00000421000.1 C9IYB9 C9JP72 ENST00000419173.5 C9JR71 ENST00000399932.8 [Q9H0X4-1] C9K0C5 ENST00000420046.5 ENST00000420500.5 C9J1M4 ENST00000666018.1 [Q9H0X4-2] ENST00000424016.1 ENST00000453430.5 C9JJN3 ENST00000426695.5 C9J3Y6 C9JTF7 ENST00000600536.1 ENST00000659283.1 [Q9H0X4-2] C9J8V3 ENST00000417499.1 H7C2U8 ENST00000447499.1 ENST00000653392.1 ENST00000301678.7 [Q9H0X4-1] ENST00000449945.5 B4DGG1 |