ELMOD1 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	12 studies	42% ± 23%	Explore
oligodendrocyte precursor cell	8 studies	31% ± 12%	Explore
GABAergic neuron	7 studies	50% ± 18%	Explore
amacrine cell	5 studies	38% ± 16%	Explore
interneuron	5 studies	45% ± 19%	Explore
neuron	4 studies	23% ± 5%	Explore
retina horizontal cell	4 studies	24% ± 6%	Explore
GABAergic interneuron	3 studies	25% ± 2%	Explore
rod bipolar cell	3 studies	25% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	11 studies	32% ± 22%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	95%	3628.65	2522 / 2642	99%	16.83	697 / 705
skin	69%	1928.14	1247 / 1809	8%	0.30	37 / 472
adrenal gland	3%	20.70	7 / 258	44%	3.27	102 / 230
heart	33%	207.59	287 / 861	0%	0	0 / 0
kidney	7%	26.12	6 / 89	17%	0.67	150 / 901
muscle	15%	102.08	118 / 803	0%	0	0 / 0
uterus	2%	17.17	3 / 170	4%	0.40	18 / 459
lung	0%	2.28	2 / 578	3%	0.06	34 / 1155
esophagus	1%	6.18	21 / 1445	2%	0.03	3 / 183
eye	0%	0	0 / 0	3%	0.19	2 / 80
tonsil	0%	0	0 / 0	2%	0.04	1 / 45
thymus	0%	0	0 / 653	2%	0.05	12 / 605
liver	0%	0	0 / 226	2%	0.06	8 / 406
stomach	0%	0.91	1 / 359	1%	0.02	4 / 286
breast	0%	0	0 / 459	2%	0.03	18 / 1118
prostate	0%	1.33	1 / 245	1%	0.01	5 / 502
ovary	0%	0	0 / 180	1%	0.05	5 / 430
pancreas	0%	0	0 / 328	1%	0.03	2 / 178
intestine	0%	1.03	2 / 966	1%	0.03	4 / 527
bladder	0%	0	0 / 21	1%	0.02	4 / 504
adipose	0%	2.12	4 / 1204	0%	0	0 / 0
blood vessel	0%	1.86	4 / 1335	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1