EFCAB5 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	26% ± 4%	Explore
glutamatergic neuron	3 studies	35% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	26% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	66.36	2610 / 2642	6%	0.08	40 / 705
skin	90%	19.48	1636 / 1809	13%	0.21	60 / 472
intestine	98%	40.97	942 / 966	2%	0.02	8 / 527
thymus	97%	29.66	631 / 653	1%	0.01	6 / 605
spleen	97%	25.24	234 / 241	0%	0	0 / 0
lung	90%	20.97	521 / 578	1%	0.03	17 / 1155
kidney	90%	26.91	80 / 89	1%	0.01	9 / 901
stomach	87%	17.62	314 / 359	2%	0.04	7 / 286
prostate	80%	13.78	196 / 245	0%	0	0 / 502
bladder	76%	15.24	16 / 21	2%	0.04	11 / 504
adipose	77%	13.30	922 / 1204	0%	0	0 / 0
breast	75%	13.55	346 / 459	1%	0.05	11 / 1118
esophagus	73%	12.25	1055 / 1445	1%	0.04	2 / 183
uterus	70%	9.95	119 / 170	0%	0.01	2 / 459
blood vessel	67%	10.04	900 / 1335	0%	0	0 / 0
muscle	67%	11.30	540 / 803	0%	0	0 / 0
pancreas	63%	8.08	206 / 328	1%	0.01	2 / 178
peripheral blood	62%	10.35	574 / 929	0%	0	0 / 0
heart	61%	8.76	528 / 861	0%	0	0 / 0
adrenal gland	61%	8.11	158 / 258	0%	0	0 / 230
eye	0%	0	0 / 0	46%	1.31	37 / 80
ovary	42%	4.98	75 / 180	0%	0	0 / 430
liver	15%	1.47	35 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	7%	0.19	2 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1