EFCAB10 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	44% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
ovary	98%	25.16	176 / 180	40%	1.19	173 / 430
esophagus	85%	14.61	1232 / 1445	45%	0.77	82 / 183
lung	98%	63.85	568 / 578	30%	0.73	348 / 1155
brain	97%	44.89	2571 / 2642	24%	0.69	168 / 705
kidney	98%	17.93	87 / 89	9%	0.14	80 / 901
uterus	97%	30.21	165 / 170	8%	0.22	36 / 459
breast	90%	13.30	411 / 459	11%	0.25	127 / 1118
thymus	98%	22.14	640 / 653	3%	0.03	16 / 605
prostate	97%	27.62	238 / 245	3%	0.06	17 / 502
intestine	92%	15.31	886 / 966	6%	0.09	31 / 527
spleen	97%	27.11	234 / 241	0%	0	0 / 0
stomach	86%	11.97	307 / 359	11%	0.18	32 / 286
pancreas	89%	15.01	292 / 328	4%	0.11	8 / 178
skin	86%	11.37	1562 / 1809	6%	0.08	27 / 472
liver	90%	16.59	204 / 226	1%	0.01	3 / 406
adipose	89%	13.57	1077 / 1204	0%	0	0 / 0
adrenal gland	88%	14.87	226 / 258	1%	0.01	2 / 230
bladder	76%	10.52	16 / 21	8%	0.13	38 / 504
heart	69%	8.07	597 / 861	0%	0	0 / 0
blood vessel	64%	6.97	849 / 1335	0%	0	0 / 0
muscle	44%	3.49	352 / 803	0%	0	0 / 0
peripheral blood	41%	5.43	379 / 929	0%	0	0 / 0
tonsil	0%	0	0 / 0	4%	0.17	2 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1