ECM2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	15 studies	25% ± 5%	Explore
adipocyte	7 studies	38% ± 14%	Explore
smooth muscle cell	6 studies	19% ± 4%	Explore
pericyte	6 studies	19% ± 4%	Explore
astrocyte	3 studies	21% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	99%	4009.97	454 / 459	92%	17.29	1029 / 1118
liver	85%	1342.89	193 / 226	85%	13.32	347 / 406
lung	90%	1820.18	518 / 578	75%	6.81	866 / 1155
thymus	94%	1776.42	611 / 653	69%	5.32	418 / 605
prostate	78%	1174.98	190 / 245	85%	7.81	427 / 502
ovary	100%	5766.65	180 / 180	46%	3.38	196 / 430
uterus	99%	2669.07	168 / 170	33%	2.92	151 / 459
kidney	53%	614.91	47 / 89	74%	11.59	669 / 901
esophagus	53%	763.72	761 / 1445	69%	5.09	126 / 183
adrenal gland	41%	409.27	105 / 258	67%	7.30	155 / 230
adipose	100%	5296.89	1204 / 1204	0%	0	0 / 0
blood vessel	100%	7922.42	1335 / 1335	0%	0	0 / 0
brain	12%	148.80	322 / 2642	87%	18.61	615 / 705
skin	64%	1071.03	1164 / 1809	28%	2.31	130 / 472
pancreas	2%	20.64	8 / 328	88%	11.07	156 / 178
intestine	48%	631.00	465 / 966	34%	3.07	179 / 527
bladder	43%	514.10	9 / 21	36%	2.67	182 / 504
stomach	22%	287.65	80 / 359	56%	5.32	160 / 286
heart	73%	1382.13	632 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	47%	3.07	21 / 45
muscle	19%	198.68	156 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	7%	0.26	2 / 29
eye	0%	0	0 / 0	4%	0.19	3 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1