ECHDC3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell of proximal tubule	5 studies	25% ± 3%	Explore
adipocyte	5 studies	22% ± 3%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	4092.61	457 / 459	96%	31.42	1069 / 1118
thymus	100%	1547.98	650 / 653	95%	32.68	572 / 605
kidney	100%	4208.85	89 / 89	94%	55.01	843 / 901
liver	100%	6619.85	226 / 226	92%	92.24	372 / 406
ovary	82%	726.79	147 / 180	99%	35.18	424 / 430
prostate	95%	1164.30	232 / 245	81%	29.79	406 / 502
lung	95%	1466.44	549 / 578	75%	22.20	871 / 1155
skin	82%	1224.71	1488 / 1809	88%	15.15	414 / 472
uterus	94%	898.43	160 / 170	70%	17.92	321 / 459
pancreas	99%	1205.17	324 / 328	57%	7.76	101 / 178
adrenal gland	97%	2242.33	250 / 258	40%	12.55	92 / 230
stomach	89%	1484.09	318 / 359	44%	10.32	126 / 286
esophagus	70%	858.43	1011 / 1445	54%	15.85	99 / 183
eye	0%	0	0 / 0	100%	21.61	80 / 80
ureter	0%	0	0 / 0	100%	7.42	1 / 1
muscle	100%	5803.89	802 / 803	0%	0	0 / 0
adipose	99%	4610.51	1186 / 1204	0%	0	0 / 0
spleen	95%	1263.06	229 / 241	0%	0	0 / 0
heart	95%	2747.79	818 / 861	0%	0	0 / 0
bladder	57%	623.38	12 / 21	32%	9.50	160 / 504
intestine	46%	326.45	443 / 966	37%	8.51	197 / 527
tonsil	0%	0	0 / 0	73%	17.36	33 / 45
peripheral blood	62%	1397.97	580 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	59%	6.90	17 / 29
blood vessel	52%	414.73	688 / 1335	0%	0	0 / 0
brain	4%	21.12	105 / 2642	17%	1.82	122 / 705
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0