Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 11 studies | 22% ± 5% | |
oligodendrocyte precursor cell | 6 studies | 37% ± 16% | |
oligodendrocyte | 4 studies | 32% ± 13% |
Insufficient scRNA-seq data for expression of DSEL at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 863.40 | 2640 / 2642 | 100% | 18.37 | 703 / 705 |
prostate | 98% | 339.60 | 239 / 245 | 92% | 3.63 | 462 / 502 |
breast | 100% | 839.83 | 459 / 459 | 80% | 3.73 | 896 / 1118 |
kidney | 89% | 355.46 | 79 / 89 | 80% | 5.25 | 725 / 901 |
lung | 100% | 879.64 | 577 / 578 | 68% | 2.35 | 786 / 1155 |
ovary | 100% | 617.28 | 180 / 180 | 65% | 1.98 | 281 / 430 |
adrenal gland | 89% | 257.86 | 230 / 258 | 70% | 6.21 | 161 / 230 |
pancreas | 66% | 164.02 | 216 / 328 | 79% | 2.76 | 141 / 178 |
liver | 89% | 387.56 | 202 / 226 | 47% | 2.56 | 190 / 406 |
uterus | 99% | 595.53 | 168 / 170 | 36% | 1.65 | 166 / 459 |
bladder | 100% | 517.62 | 21 / 21 | 30% | 0.75 | 151 / 504 |
esophagus | 79% | 385.50 | 1142 / 1445 | 45% | 1.06 | 82 / 183 |
thymus | 96% | 335.05 | 625 / 653 | 24% | 0.65 | 147 / 605 |
skin | 92% | 1839.19 | 1657 / 1809 | 22% | 0.69 | 103 / 472 |
stomach | 77% | 299.31 | 278 / 359 | 32% | 0.97 | 91 / 286 |
intestine | 91% | 516.88 | 879 / 966 | 16% | 0.46 | 82 / 527 |
adipose | 100% | 998.70 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1560.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 93% | 323.77 | 225 / 241 | 0% | 0 | 0 / 0 |
heart | 84% | 358.85 | 721 / 861 | 0% | 0 | 0 / 0 |
muscle | 31% | 73.01 | 248 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 29% | 0.55 | 13 / 45 |
eye | 0% | 0 | 0 / 0 | 6% | 0.08 | 5 / 80 |
peripheral blood | 1% | 1.90 | 7 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030208 | Biological process | dermatan sulfate biosynthetic process |
GO_0030205 | Biological process | dermatan sulfate metabolic process |
GO_0030204 | Biological process | chondroitin sulfate metabolic process |
GO_0000139 | Cellular component | Golgi membrane |
GO_0047757 | Molecular function | chondroitin-glucuronate 5-epimerase activity |
GO_0008146 | Molecular function | sulfotransferase activity |
Gene name | DSEL |
Protein name | Dermatan-sulfate epimerase-like protein (EC 5.1.-.-) |
Synonyms | NCAG1 C18orf4 |
Description | |
Accessions | ENST00000572659.1 Q8IZU8 ENST00000310045.9 |