Name | Number of supported studies | Average coverage | |
---|---|---|---|
enterocyte | 3 studies | 22% ± 7% |
Insufficient scRNA-seq data for expression of CYP2C18 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 5476.00 | 226 / 226 | 90% | 38.95 | 367 / 406 |
stomach | 70% | 1275.84 | 250 / 359 | 59% | 7.95 | 170 / 286 |
esophagus | 39% | 1137.32 | 565 / 1445 | 69% | 11.71 | 127 / 183 |
intestine | 39% | 616.93 | 374 / 966 | 59% | 5.47 | 310 / 527 |
pancreas | 5% | 8.11 | 16 / 328 | 80% | 14.93 | 142 / 178 |
tonsil | 0% | 0 | 0 / 0 | 73% | 9.88 | 33 / 45 |
skin | 68% | 305.49 | 1223 / 1809 | 2% | 0.06 | 8 / 472 |
lung | 5% | 7.13 | 31 / 578 | 50% | 5.46 | 576 / 1155 |
uterus | 1% | 21.32 | 2 / 170 | 36% | 3.57 | 163 / 459 |
bladder | 0% | 0 | 0 / 21 | 29% | 2.34 | 145 / 504 |
kidney | 1% | 1.43 | 1 / 89 | 3% | 0.20 | 27 / 901 |
peripheral blood | 2% | 4.43 | 16 / 929 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 1% | 0.07 | 9 / 605 |
breast | 0% | 1.66 | 2 / 459 | 1% | 0.03 | 7 / 1118 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.04 | 3 / 430 |
adipose | 0% | 1.21 | 5 / 1204 | 0% | 0 | 0 / 0 |
spleen | 0% | 9.00 | 1 / 241 | 0% | 0 | 0 / 0 |
prostate | 0% | 0 | 0 / 245 | 0% | 0.01 | 1 / 502 |
muscle | 0% | 0.26 | 1 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 0.12 | 1 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.09 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0 | 0 / 258 | 0% | 0 | 0 / 230 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0019373 | Biological process | epoxygenase P450 pathway |
GO_0006805 | Biological process | xenobiotic metabolic process |
GO_0043651 | Biological process | linoleic acid metabolic process |
GO_0042573 | Biological process | retinoic acid metabolic process |
GO_0042572 | Biological process | retinol metabolic process |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005737 | Cellular component | cytoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0019825 | Molecular function | oxygen binding |
GO_0004497 | Molecular function | monooxygenase activity |
GO_0005506 | Molecular function | iron ion binding |
GO_0008392 | Molecular function | arachidonic acid epoxygenase activity |
GO_0071614 | Molecular function | linoleic acid epoxygenase activity |
GO_0008401 | Molecular function | retinoic acid 4-hydroxylase activity |
GO_0020037 | Molecular function | heme binding |
GO_0070330 | Molecular function | aromatase activity |
GO_0016712 | Molecular function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen |
Gene name | CYP2C18 |
Protein name | Cytochrome P450 2C18 (EC 1.14.14.1) (CYPIIC18) (Cytochrome P450-6b/29c) unspecific monooxygenase (EC 1.14.14.1) |
Synonyms | |
Description | FUNCTION: A cytochrome P450 monooxygenase involved in retinoid metabolism. Hydroxylates all trans-retinoic acid (atRA) to 4-hydroxyretinoate and may modulate atRA signaling and clearance. Mechanistically, uses molecular oxygen inserting one oxygen atom into a substrate, and reducing the second into a water molecule, with two electrons provided by NADPH via cytochrome P450 reductase (CPR; NADPH-ferrihemoprotein reductase). . |
Accessions | Q2XN56 ENST00000339022.6 [P33260-2] ENST00000285979.11 [P33260-1] P33260 |