CPN2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
hepatocyte	3 studies	31% ± 13%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	14187.24	226 / 226	91%	190.31	371 / 406
kidney	96%	1528.88	85 / 89	26%	6.49	234 / 901
adrenal gland	100%	432.37	258 / 258	19%	10.73	44 / 230
spleen	90%	111.33	217 / 241	0%	0	0 / 0
adipose	59%	27.61	713 / 1204	0%	0	0 / 0
breast	34%	8.62	154 / 459	12%	0.34	131 / 1118
heart	45%	32.72	389 / 861	0%	0	0 / 0
intestine	30%	6.23	291 / 966	1%	0.56	7 / 527
stomach	29%	4.78	105 / 359	1%	0.02	4 / 286
skin	25%	5.37	455 / 1809	5%	1.19	25 / 472
thymus	20%	2.62	130 / 653	0%	0.00	1 / 605
esophagus	16%	2.63	233 / 1445	1%	0.01	1 / 183
peripheral blood	16%	11.35	144 / 929	0%	0	0 / 0
lung	12%	1.56	69 / 578	1%	0.06	17 / 1155
bladder	10%	0.95	2 / 21	1%	0.08	5 / 504
uterus	6%	0.75	11 / 170	3%	0.09	14 / 459
ovary	6%	0.68	11 / 180	0%	0.00	1 / 430
blood vessel	6%	2.72	84 / 1335	0%	0	0 / 0
prostate	5%	0.53	13 / 245	0%	0	0 / 502
brain	4%	0.48	105 / 2642	0%	0.00	1 / 705
pancreas	2%	0.20	6 / 328	2%	0.03	3 / 178
lymph node	0%	0	0 / 0	3%	0.05	1 / 29
muscle	2%	0.25	18 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1