CPA2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
acinar cell	4 studies	86% ± 15%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
pancreas	3 studies	30% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	591370.55	328 / 328	66%	1045.44	117 / 178
stomach	89%	4196.48	320 / 359	30%	84.70	86 / 286
skin	38%	49.50	695 / 1809	75%	5.22	354 / 472
adrenal gland	85%	69.69	219 / 258	4%	0.37	10 / 230
intestine	61%	100.57	590 / 966	25%	35.19	131 / 527
brain	55%	82.16	1447 / 2642	26%	0.47	181 / 705
ovary	64%	58.90	116 / 180	15%	18.83	66 / 430
uterus	59%	48.32	101 / 170	13%	0.52	59 / 459
spleen	72%	70.37	173 / 241	0%	0	0 / 0
bladder	57%	28.00	12 / 21	10%	0.69	50 / 504
liver	61%	71.83	137 / 226	6%	11.00	26 / 406
adipose	67%	273.54	801 / 1204	0%	0	0 / 0
breast	62%	160.38	283 / 459	3%	0.07	35 / 1118
esophagus	49%	74.54	708 / 1445	15%	6.51	27 / 183
lung	43%	41.95	246 / 578	12%	0.94	136 / 1155
prostate	52%	82.23	128 / 245	0%	0.01	1 / 502
kidney	51%	43.74	45 / 89	2%	0.35	15 / 901
blood vessel	43%	138.35	571 / 1335	0%	0	0 / 0
thymus	40%	41.68	264 / 653	1%	0.04	7 / 605
peripheral blood	36%	32.27	335 / 929	0%	0	0 / 0
heart	33%	47.06	288 / 861	0%	0	0 / 0
muscle	29%	24.75	231 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	18%	0.74	14 / 80
tonsil	0%	0	0 / 0	2%	0.05	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1