Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 14 studies | 68% ± 17% | |
glutamatergic neuron | 12 studies | 67% ± 21% | |
GABAergic neuron | 11 studies | 59% ± 26% | |
interneuron | 6 studies | 66% ± 21% | |
neuron | 5 studies | 47% ± 26% | |
endothelial cell | 4 studies | 47% ± 16% | |
microglial cell | 4 studies | 41% ± 24% | |
retinal ganglion cell | 4 studies | 71% ± 18% | |
astrocyte | 4 studies | 37% ± 30% | |
oligodendrocyte | 4 studies | 37% ± 27% | |
GABAergic interneuron | 3 studies | 66% ± 8% | |
granule cell | 3 studies | 44% ± 20% | |
GABAergic amacrine cell | 3 studies | 31% ± 7% | |
OFF-bipolar cell | 3 studies | 81% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 42% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 95% | 90.44 | 2506 / 2642 | 58% | 2.95 | 410 / 705 |
kidney | 62% | 33.47 | 55 / 89 | 21% | 2.07 | 186 / 901 |
adrenal gland | 18% | 7.65 | 46 / 258 | 32% | 1.58 | 74 / 230 |
intestine | 32% | 9.61 | 311 / 966 | 1% | 0.03 | 5 / 527 |
bladder | 29% | 7.62 | 6 / 21 | 2% | 0.05 | 10 / 504 |
eye | 0% | 0 | 0 / 0 | 23% | 1.01 | 18 / 80 |
pancreas | 6% | 1.10 | 20 / 328 | 3% | 0.11 | 6 / 178 |
breast | 7% | 2.48 | 34 / 459 | 0% | 0.01 | 4 / 1118 |
esophagus | 2% | 0.99 | 29 / 1445 | 5% | 0.12 | 10 / 183 |
lung | 0% | 0 | 0 / 578 | 5% | 0.10 | 54 / 1155 |
skin | 0% | 0.05 | 5 / 1809 | 4% | 0.14 | 18 / 472 |
stomach | 1% | 0.22 | 5 / 359 | 2% | 0.03 | 6 / 286 |
ovary | 0% | 0 | 0 / 180 | 3% | 0.07 | 14 / 430 |
liver | 0% | 0 | 0 / 226 | 2% | 0.16 | 10 / 406 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
prostate | 0% | 0.11 | 1 / 245 | 1% | 0.01 | 4 / 502 |
spleen | 1% | 0.13 | 2 / 241 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 1% | 0.03 | 5 / 605 |
uterus | 0% | 0 | 0 / 170 | 1% | 0.01 | 3 / 459 |
blood vessel | 0% | 0.03 | 3 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.01 | 1 / 803 | 0% | 0 | 0 / 0 |
adipose | 0% | 0.02 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007155 | Biological process | cell adhesion |
GO_0016020 | Cellular component | membrane |
Gene name | CNTNAP5 |
Protein name | Contactin associated protein family member 5 Contactin-associated protein-like 5 (Cell recognition molecule Caspr5) |
Synonyms | CASPR5 |
Description | FUNCTION: May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication. FUNCTION: May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication. . |
Accessions | ENST00000431078.1 A0A804HKY0 Q8WYK1 ENST00000682447.1 |