Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 12 studies | 34% ± 16% | |
GABAergic neuron | 11 studies | 42% ± 26% | |
oligodendrocyte | 11 studies | 33% ± 11% | |
glutamatergic neuron | 10 studies | 47% ± 24% | |
astrocyte | 10 studies | 36% ± 16% | |
endothelial cell | 8 studies | 28% ± 10% | |
interneuron | 6 studies | 50% ± 28% | |
microglial cell | 5 studies | 22% ± 6% | |
ciliated cell | 5 studies | 38% ± 17% | |
smooth muscle cell | 5 studies | 28% ± 7% | |
granule cell | 4 studies | 28% ± 7% | |
cardiac muscle cell | 4 studies | 21% ± 5% | |
macrophage | 4 studies | 20% ± 3% | |
pericyte | 4 studies | 27% ± 11% | |
neuron | 3 studies | 38% ± 11% | |
GABAergic interneuron | 3 studies | 35% ± 6% | |
epithelial cell | 3 studies | 51% ± 13% | |
GABAergic amacrine cell | 3 studies | 24% ± 6% | |
amacrine cell | 3 studies | 27% ± 2% | |
glycinergic amacrine cell | 3 studies | 20% ± 1% | |
retina horizontal cell | 3 studies | 25% ± 2% | |
ependymal cell | 3 studies | 31% ± 14% | |
fibroblast | 3 studies | 26% ± 8% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 61% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 99% | 716.04 | 1437 / 1445 | 100% | 3.87 | 183 / 183 |
thymus | 100% | 1330.70 | 653 / 653 | 99% | 4.03 | 600 / 605 |
adrenal gland | 100% | 3083.46 | 258 / 258 | 99% | 5.53 | 228 / 230 |
prostate | 100% | 892.45 | 245 / 245 | 99% | 4.16 | 497 / 502 |
intestine | 100% | 1320.52 | 965 / 966 | 99% | 3.35 | 521 / 527 |
stomach | 100% | 821.86 | 359 / 359 | 99% | 4.11 | 282 / 286 |
kidney | 100% | 1306.26 | 89 / 89 | 98% | 3.91 | 885 / 901 |
lung | 100% | 1184.06 | 578 / 578 | 98% | 3.20 | 1128 / 1155 |
pancreas | 99% | 612.41 | 325 / 328 | 98% | 3.26 | 175 / 178 |
brain | 100% | 1450.35 | 2637 / 2642 | 97% | 4.22 | 687 / 705 |
bladder | 100% | 967.52 | 21 / 21 | 97% | 2.81 | 490 / 504 |
ovary | 100% | 1378.16 | 180 / 180 | 97% | 3.25 | 415 / 430 |
skin | 100% | 953.19 | 1806 / 1809 | 97% | 2.87 | 456 / 472 |
liver | 99% | 621.83 | 224 / 226 | 96% | 2.64 | 388 / 406 |
uterus | 100% | 1249.84 | 170 / 170 | 94% | 2.55 | 432 / 459 |
breast | 99% | 799.94 | 456 / 459 | 93% | 2.77 | 1040 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 5.22 | 80 / 80 |
spleen | 100% | 591.05 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.84 | 1 / 1 |
blood vessel | 100% | 2468.11 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 99% | 867.92 | 1195 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 2.64 | 43 / 45 |
heart | 87% | 399.91 | 746 / 861 | 0% | 0 | 0 / 0 |
muscle | 82% | 310.15 | 662 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 76% | 357.95 | 709 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 0.94 | 19 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006810 | Biological process | transport |
GO_0010960 | Biological process | magnesium ion homeostasis |
GO_1903830 | Biological process | magnesium ion transmembrane transport |
GO_0016323 | Cellular component | basolateral plasma membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0015095 | Molecular function | magnesium ion transmembrane transporter activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | CNNM2 |
Protein name | Metal transporter CNNM2 (Ancient conserved domain-containing protein 2) (Cyclin-M2) |
Synonyms | ACDP2 |
Description | FUNCTION: Divalent metal cation transporter. Mediates transport of divalent metal cations in an order of Mg(2+) > Co(2+) > Mn(2+) > Sr(2+) > Ba(2+) > Cu(2+) > Fe(2+) (By similarity). . |
Accessions | ENST00000369878.9 [Q9H8M5-1] ENST00000433628.2 [Q9H8M5-2] Q9H8M5 ENST00000369875.3 [Q9H8M5-3] |