CLEC9A | OmnibusX

Name	Number of supported studies	Average coverage
conventional dendritic cell	8 studies	29% ± 13%	Explore
microglial cell	4 studies	21% ± 4%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of CLEC9A at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	90%	95.52	2379 / 2642	72%	3.62	508 / 705
lung	95%	41.59	547 / 578	13%	0.21	150 / 1155
breast	81%	17.07	370 / 459	22%	0.41	244 / 1118
thymus	69%	14.72	449 / 653	33%	1.27	202 / 605
prostate	76%	22.88	185 / 245	21%	0.33	105 / 502
spleen	95%	77.19	230 / 241	0%	0	0 / 0
kidney	39%	9.35	35 / 89	49%	1.40	443 / 901
lymph node	0%	0	0 / 0	86%	7.25	25 / 29
intestine	69%	23.61	667 / 966	3%	0.07	16 / 527
uterus	66%	13.71	112 / 170	6%	0.11	28 / 459
adipose	69%	13.89	831 / 1204	0%	0	0 / 0
peripheral blood	64%	19.13	597 / 929	0%	0	0 / 0
bladder	52%	13.86	11 / 21	4%	0.06	22 / 504
blood vessel	47%	9.75	621 / 1335	0%	0	0 / 0
ovary	43%	7.25	77 / 180	3%	0.05	11 / 430
skin	24%	4.10	441 / 1809	17%	0.44	82 / 472
tonsil	0%	0	0 / 0	38%	0.59	17 / 45
pancreas	15%	2.02	48 / 328	23%	0.40	41 / 178
stomach	29%	4.57	104 / 359	6%	0.09	16 / 286
esophagus	28%	4.42	402 / 1445	6%	0.12	11 / 183
adrenal gland	25%	3.79	64 / 258	6%	0.09	13 / 230
heart	24%	3.19	204 / 861	0%	0	0 / 0
liver	11%	1.80	25 / 226	6%	0.12	26 / 406
muscle	5%	0.69	44 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	4%	0.07	3 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

Gene name	CLEC9A
Protein name	C-type lectin domain family 9 member A (CD antigen CD370)
Synonyms	UNQ9341/PRO34046
Description	FUNCTION: Functions as an endocytic receptor on a small subset of myeloid cells specialized for the uptake and processing of material from dead cells. Recognizes filamentous form of actin in association with particular actin-binding domains of cytoskeletal proteins, including spectrin, exposed when cell membranes are damaged, and mediate the cross-presentation of dead-cell associated antigens in a Syk-dependent manner. .
Accessions	Q6UXN8 ENST00000355819.6

GO_0001819	Biological process	positive regulation of cytokine production
GO_0006898	Biological process	receptor-mediated endocytosis
GO_0009986	Cellular component	cell surface
GO_0016020	Cellular component	membrane
GO_0030246	Molecular function	carbohydrate binding

CLEC9A report