CFAP96 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	17 studies	40% ± 20%	Explore
glutamatergic neuron	4 studies	41% ± 18%	Explore
endothelial cell	3 studies	24% ± 10%	Explore
retinal cone cell	3 studies	33% ± 10%	Explore
astrocyte	3 studies	19% ± 2%	Explore
ependymal cell	3 studies	53% ± 19%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	27% ± 16%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	143.42	89 / 89	86%	13.06	775 / 901
brain	99%	158.42	2619 / 2642	82%	6.98	576 / 705
thymus	100%	286.63	652 / 653	75%	4.30	455 / 605
ovary	89%	64.88	160 / 180	81%	5.46	349 / 430
breast	66%	44.66	302 / 459	66%	2.93	743 / 1118
lung	78%	120.98	450 / 578	54%	3.01	625 / 1155
prostate	84%	53.24	205 / 245	42%	1.44	212 / 502
skin	77%	41.45	1399 / 1809	46%	2.06	215 / 472
pancreas	80%	35.07	261 / 328	40%	1.91	72 / 178
uterus	69%	64.42	117 / 170	48%	3.30	222 / 459
adrenal gland	57%	22.86	148 / 258	24%	1.45	55 / 230
esophagus	60%	27.68	863 / 1445	20%	0.80	36 / 183
blood vessel	78%	45.31	1044 / 1335	0%	0	0 / 0
bladder	38%	17.29	8 / 21	25%	1.09	125 / 504
adipose	55%	28.72	659 / 1204	0%	0	0 / 0
heart	54%	31.21	467 / 861	0%	0	0 / 0
intestine	44%	18.63	421 / 966	8%	0.45	40 / 527
stomach	42%	16.06	151 / 359	7%	0.27	21 / 286
liver	26%	10.54	58 / 226	8%	0.28	31 / 406
tonsil	0%	0	0 / 0	27%	1.14	12 / 45
spleen	24%	9.22	57 / 241	0%	0	0 / 0
peripheral blood	18%	19.35	165 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	8%	0.24	6 / 80
muscle	3%	1.00	27 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1