CENPN | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of CENPN at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	99%	228.12	1434 / 1445	100%	14.78	183 / 183
stomach	99%	184.53	357 / 359	100%	11.04	285 / 286
prostate	100%	1352.95	245 / 245	99%	35.97	497 / 502
skin	99%	516.99	1795 / 1809	98%	12.75	463 / 472
intestine	100%	181.66	962 / 966	98%	10.87	515 / 527
lung	99%	220.77	573 / 578	97%	9.91	1122 / 1155
bladder	100%	158.86	21 / 21	96%	10.16	483 / 504
uterus	95%	85.40	162 / 170	98%	13.38	451 / 459
breast	100%	147.51	458 / 459	93%	7.11	1037 / 1118
ovary	94%	84.78	169 / 180	96%	6.42	411 / 430
pancreas	94%	90.57	307 / 328	92%	4.73	163 / 178
liver	100%	188.66	226 / 226	82%	4.38	334 / 406
brain	98%	145.52	2594 / 2642	84%	4.99	589 / 705
kidney	100%	153.56	89 / 89	66%	2.63	599 / 901
adrenal gland	100%	256.02	258 / 258	60%	3.25	139 / 230
thymus	99%	139.43	648 / 653	60%	2.61	365 / 605
lymph node	0%	0	0 / 0	100%	11.90	29 / 29
spleen	100%	241.60	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	15.58	45 / 45
ureter	0%	0	0 / 0	100%	5.14	1 / 1
adipose	100%	177.73	1203 / 1204	0%	0	0 / 0
blood vessel	99%	136.18	1317 / 1335	0%	0	0 / 0
muscle	98%	153.85	787 / 803	0%	0	0 / 0
heart	94%	204.56	810 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	78%	3.40	62 / 80
peripheral blood	69%	387.39	641 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

Gene name	CENPN
Protein name	Centromere protein N Centromere protein N (CENP-N) (Interphase centromere complex protein 32)
Synonyms	BM-309 ICEN32 C16orf60
Description	FUNCTION: Component of the CENPA-NAC (nucleosome-associated) complex, a complex that plays a central role in assembly of kinetochore proteins, mitotic progression and chromosome segregation. The CENPA-NAC complex recruits the CENPA-CAD (nucleosome distal) complex and may be involved in incorporation of newly synthesized CENPA into centromeres. CENPN is the first protein to bind specifically to CENPA nucleosomes and the direct binding of CENPA nucleosomes by CENPN is required for centromere assembly. Required for chromosome congression and efficiently align the chromosomes on a metaphase plate. .
Accessions	ENST00000305850.10 [Q96H22-1] ENST00000393335.7 [Q96H22-3] Q96H22 ENST00000439957.7 [Q96H22-4] ENST00000709374.1 [Q96H22-5] H3BMC7 H3BRU7 ENST00000428963.6 [Q96H22-5] H3BMD5 ENST00000709372.1 [Q96H22-3] ENST00000564669.5 ENST00000709370.1 [Q96H22-2] ENST00000568445.1 ENST00000562943.1 ENST00000709369.1 [Q96H22-1] ENST00000299572.9 [Q96H22-2] ENST00000709371.1 [Q96H22-4]

GO_0034080	Biological process	CENP-A containing chromatin assembly
GO_0007059	Biological process	chromosome segregation
GO_0005654	Cellular component	nucleoplasm
GO_0005829	Cellular component	cytosol
GO_0000939	Cellular component	inner kinetochore
GO_0005634	Cellular component	nucleus

CENPN report