CELF4 | OmnibusX

Name	Number of supported studies	Average coverage
glutamatergic neuron	13 studies	65% ± 23%	Explore
GABAergic neuron	10 studies	69% ± 20%	Explore
neuron	8 studies	58% ± 20%	Explore
amacrine cell	8 studies	67% ± 17%	Explore
interneuron	7 studies	67% ± 21%	Explore
retinal ganglion cell	7 studies	61% ± 29%	Explore
retina horizontal cell	6 studies	69% ± 7%	Explore
retinal bipolar neuron	5 studies	23% ± 7%	Explore
granule cell	4 studies	64% ± 14%	Explore
GABAergic amacrine cell	4 studies	73% ± 9%	Explore
glycinergic amacrine cell	4 studies	58% ± 18%	Explore
OFF-bipolar cell	4 studies	46% ± 26%	Explore
endothelial cell	3 studies	48% ± 22%	Explore
GABAergic interneuron	3 studies	81% ± 10%	Explore
oligodendrocyte precursor cell	3 studies	20% ± 6%	Explore
ON-bipolar cell	3 studies	42% ± 33%	Explore

Name	Number of supported studies	Average coverage
brain	15 studies	43% ± 24%	Explore
eye	5 studies	23% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	96%	7662.05	2524 / 2642	88%	15.82	622 / 705
adrenal gland	13%	165.38	33 / 258	71%	43.69	164 / 230
ovary	0%	0	0 / 180	81%	2.84	347 / 430
thymus	0%	0	0 / 653	63%	2.12	382 / 605
pancreas	0%	1.77	1 / 328	34%	1.59	61 / 178
uterus	0%	0	0 / 170	31%	0.75	140 / 459
kidney	0%	0	0 / 89	22%	0.47	201 / 901
lung	0%	0	0 / 578	22%	0.59	252 / 1155
breast	0%	0	0 / 459	15%	0.76	164 / 1118
tonsil	0%	0	0 / 0	11%	0.77	5 / 45
prostate	2%	18.03	6 / 245	9%	0.19	43 / 502
stomach	0%	1.62	1 / 359	8%	0.22	24 / 286
esophagus	0%	0.38	1 / 1445	7%	0.31	12 / 183
intestine	2%	12.87	18 / 966	5%	0.17	25 / 527
bladder	0%	0	0 / 21	6%	0.31	30 / 504
liver	0%	0	0 / 226	5%	0.13	21 / 406
skin	0%	0.62	1 / 1809	4%	0.11	20 / 472
eye	0%	0	0 / 0	3%	0.16	2 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 1204	0%	0	0 / 0
blood vessel	0%	0	0 / 1335	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006376	Biological process	mRNA splice site recognition
GO_1902866	Biological process	regulation of retina development in camera-type eye
GO_0001701	Biological process	in utero embryonic development
GO_0060079	Biological process	excitatory postsynaptic potential
GO_0009792	Biological process	embryo development ending in birth or egg hatching
GO_0048026	Biological process	positive regulation of mRNA splicing, via spliceosome
GO_0000381	Biological process	regulation of alternative mRNA splicing, via spliceosome
GO_0000380	Biological process	alternative mRNA splicing, via spliceosome
GO_0007281	Biological process	germ cell development
GO_0090394	Biological process	negative regulation of excitatory postsynaptic potential
GO_0048025	Biological process	negative regulation of mRNA splicing, via spliceosome
GO_0017148	Biological process	negative regulation of translation
GO_0005654	Cellular component	nucleoplasm
GO_0098794	Cellular component	postsynapse
GO_0005737	Cellular component	cytoplasm
GO_1990904	Cellular component	ribonucleoprotein complex
GO_0005634	Cellular component	nucleus
GO_0000900	Molecular function	mRNA regulatory element binding translation repressor activity
GO_0003729	Molecular function	mRNA binding
GO_0042835	Molecular function	BRE binding
GO_0036002	Molecular function	pre-mRNA binding

Gene name	CELF4
Protein name	CUGBP Elav-like family member 4 (CELF-4) (Bruno-like protein 4) (CUG-BP- and ETR-3-like factor 4) (RNA-binding protein BRUNOL-4) CUGBP Elav-like family member 4 CUGBP Elav-like family member 4 (Bruno-like protein 4) (CUG-BP- and ETR-3-like factor 4) (RNA-binding protein BRUNOL-4)
Synonyms	BRUNOL4
Description	FUNCTION: RNA-binding protein implicated in the regulation of pre-mRNA alternative splicing. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Promotes exclusion of both the smooth muscle (SM) and non-muscle (NM) exons in actinin pre-mRNAs. Activates the splicing of MAPT/Tau exon 10. Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA. .
Accessions	ENST00000587819.5 B4DHA8 ENST00000593271.5 K7EJ26 K7EJD7 ENST00000587657.1 ENST00000589229.5 ENST00000587911.5 K7ERH1 ENST00000588597.5 M0QY66 Q9BZC1 ENST00000361795.9 [Q9BZC1-3] A0A0C4DGR1 ENST00000586009.5 ENST00000588591.5 K7ENR2 K7EJK3 M0R137 ENST00000591282.5 [Q9BZC1-1] ENST00000589386.5 ENST00000590112.5 A0A0A0MTT3 K7EJW4 K7EPX2 K7EQ97 ENST00000603232.6 [Q9BZC1-4] ENST00000601019.5 ENST00000420428.7 [Q9BZC1-1] ENST00000591287.5 [Q9BZC1-2] ENST00000601392.5 ENST00000334919.9 [Q9BZC1-5] ENST00000587924.1

CELF4 report