Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 46% ± 16% |
Insufficient scRNA-seq data for expression of CDHR4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 97% | 805.99 | 562 / 578 | 28% | 2.17 | 322 / 1155 |
uterus | 95% | 277.19 | 161 / 170 | 15% | 1.38 | 70 / 459 |
blood vessel | 96% | 65.16 | 1288 / 1335 | 0% | 0 | 0 / 0 |
prostate | 84% | 38.38 | 205 / 245 | 12% | 0.59 | 60 / 502 |
bladder | 86% | 31.71 | 18 / 21 | 3% | 0.14 | 17 / 504 |
skin | 82% | 45.68 | 1478 / 1809 | 0% | 0.02 | 2 / 472 |
ovary | 52% | 22.55 | 94 / 180 | 27% | 3.10 | 118 / 430 |
intestine | 74% | 37.09 | 716 / 966 | 2% | 0.06 | 8 / 527 |
adipose | 75% | 41.63 | 905 / 1204 | 0% | 0 | 0 / 0 |
breast | 57% | 23.56 | 262 / 459 | 14% | 0.80 | 156 / 1118 |
esophagus | 62% | 26.01 | 892 / 1445 | 4% | 0.07 | 7 / 183 |
thymus | 56% | 19.78 | 368 / 653 | 1% | 0.02 | 4 / 605 |
kidney | 43% | 17.21 | 38 / 89 | 4% | 0.09 | 35 / 901 |
heart | 33% | 9.09 | 284 / 861 | 0% | 0 | 0 / 0 |
stomach | 30% | 11.10 | 108 / 359 | 3% | 0.04 | 8 / 286 |
brain | 18% | 40.42 | 482 / 2642 | 4% | 0.20 | 25 / 705 |
muscle | 18% | 3.75 | 144 / 803 | 0% | 0 | 0 / 0 |
spleen | 17% | 2.76 | 41 / 241 | 0% | 0 | 0 / 0 |
liver | 13% | 3.58 | 30 / 226 | 1% | 0.02 | 4 / 406 |
adrenal gland | 14% | 2.29 | 36 / 258 | 0% | 0 | 0 / 230 |
pancreas | 1% | 0.09 | 2 / 328 | 4% | 0.12 | 7 / 178 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
peripheral blood | 2% | 2.58 | 18 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0005886 | Cellular component | plasma membrane |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | CDHR4 |
Protein name | Cadherin-related family member 4 (Cadherin-like protein 29) Cadherin related family member 4 |
Synonyms | UNQ9392/PRO34300 CDH29 |
Description | FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types (By similarity). . |
Accessions | ENST00000460430.5 ENST00000487256.1 ENST00000487666.5 ENST00000412678.7 [A6H8M9-1] ENST00000343366.8 [A6H8M9-2] A6H8M9 H7C5B2 E9PFE8 H7C4N6 |