Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 22% ± 2% |
Insufficient scRNA-seq data for expression of CCDC97 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2044.12 | 1445 / 1445 | 100% | 37.42 | 183 / 183 |
stomach | 100% | 1758.67 | 359 / 359 | 100% | 37.22 | 286 / 286 |
uterus | 100% | 2913.67 | 170 / 170 | 100% | 45.78 | 459 / 459 |
thymus | 100% | 2067.12 | 653 / 653 | 100% | 43.82 | 604 / 605 |
brain | 100% | 1354.08 | 2637 / 2642 | 100% | 43.11 | 705 / 705 |
prostate | 100% | 2469.78 | 245 / 245 | 100% | 39.94 | 501 / 502 |
skin | 100% | 2259.79 | 1809 / 1809 | 100% | 43.93 | 471 / 472 |
ovary | 100% | 2914.74 | 180 / 180 | 100% | 44.51 | 429 / 430 |
pancreas | 100% | 1443.97 | 327 / 328 | 100% | 34.97 | 178 / 178 |
intestine | 100% | 2057.31 | 966 / 966 | 99% | 37.24 | 524 / 527 |
breast | 100% | 2255.50 | 459 / 459 | 99% | 50.76 | 1111 / 1118 |
lung | 100% | 1915.01 | 577 / 578 | 99% | 41.95 | 1149 / 1155 |
bladder | 100% | 2123.38 | 21 / 21 | 99% | 38.61 | 500 / 504 |
kidney | 100% | 1524.07 | 89 / 89 | 98% | 26.98 | 887 / 901 |
adrenal gland | 100% | 1721.61 | 258 / 258 | 97% | 24.40 | 223 / 230 |
liver | 100% | 878.06 | 226 / 226 | 96% | 21.25 | 391 / 406 |
adipose | 100% | 2173.50 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1677.14 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 47.24 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 47.08 | 29 / 29 |
spleen | 100% | 2918.22 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 49.26 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.85 | 1 / 1 |
muscle | 100% | 1970.53 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1292.45 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 2528.99 | 916 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005634 | Cellular component | nucleus |
Gene name | CCDC97 |
Protein name | Coiled-coil domain-containing protein 97 Coiled-coil domain containing 97 |
Synonyms | |
Description | FUNCTION: May play a role pre-mRNA splicing through the association with the splicing factor SF3B complex which is involved in branch-site recognition. . |
Accessions | ENST00000600918.1 M0QZY6 ENST00000269967.4 ENST00000596882.1 M0QXS4 Q96F63 |