CCDC136 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
interneuron	6 studies	33% ± 19%	Explore
GABAergic neuron	6 studies	37% ± 19%	Explore
retinal bipolar neuron	5 studies	51% ± 14%	Explore
glutamatergic neuron	5 studies	38% ± 19%	Explore
neuron	4 studies	21% ± 2%	Explore
ON-bipolar cell	3 studies	42% ± 9%	Explore
retinal ganglion cell	3 studies	47% ± 20%	Explore
retina horizontal cell	3 studies	23% ± 6%	Explore
rod bipolar cell	3 studies	79% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	6 studies	30% ± 12%	Explore
eye	4 studies	18% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	3810.29	2623 / 2642	100%	23.70	702 / 705
prostate	97%	1617.07	238 / 245	93%	6.15	468 / 502
uterus	95%	986.03	161 / 170	30%	1.70	138 / 459
bladder	90%	1783.86	19 / 21	24%	0.94	119 / 504
intestine	77%	1711.25	748 / 966	17%	0.66	88 / 527
esophagus	63%	860.25	908 / 1445	31%	1.16	57 / 183
skin	25%	134.15	444 / 1809	58%	3.80	276 / 472
adrenal gland	12%	58.59	31 / 258	69%	12.08	158 / 230
blood vessel	76%	476.43	1009 / 1335	0%	0	0 / 0
stomach	43%	480.64	154 / 359	24%	1.47	70 / 286
ovary	58%	277.22	105 / 180	7%	0.23	30 / 430
lymph node	0%	0	0 / 0	59%	2.43	17 / 29
eye	0%	0	0 / 0	50%	2.74	40 / 80
breast	30%	153.97	137 / 459	19%	0.68	215 / 1118
muscle	46%	281.46	367 / 803	0%	0	0 / 0
heart	34%	186.39	291 / 861	0%	0	0 / 0
pancreas	0%	0	0 / 328	32%	1.49	57 / 178
thymus	14%	66.42	92 / 653	16%	2.17	94 / 605
lung	5%	20.31	29 / 578	21%	1.39	240 / 1155
adipose	24%	109.40	283 / 1204	0%	0	0 / 0
spleen	15%	58.60	36 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	13%	0.46	6 / 45
kidney	0%	0	0 / 89	6%	0.30	58 / 901
liver	0%	2.84	1 / 226	2%	0.09	7 / 406
peripheral blood	2%	7.87	17 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1