CC2D2B report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	6 studies	33% ± 16%	Explore
microglial cell	3 studies	20% ± 5%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	97%	106.17	632 / 653	62%	2.15	374 / 605
bladder	100%	143.48	21 / 21	2%	0.09	9 / 504
lung	99%	151.20	573 / 578	2%	0.11	28 / 1155
esophagus	97%	125.31	1404 / 1445	4%	0.06	8 / 183
blood vessel	100%	273.87	1332 / 1335	0%	0	0 / 0
prostate	98%	119.42	240 / 245	1%	0.04	7 / 502
uterus	99%	265.97	168 / 170	0%	0.01	2 / 459
adrenal gland	97%	65.69	251 / 258	2%	0.03	4 / 230
spleen	99%	116.25	238 / 241	0%	0	0 / 0
breast	97%	99.60	445 / 459	1%	0.06	16 / 1118
intestine	97%	109.32	937 / 966	1%	0.03	7 / 527
adipose	95%	88.57	1141 / 1204	0%	0	0 / 0
brain	89%	59.67	2354 / 2642	5%	0.07	32 / 705
kidney	85%	58.20	76 / 89	8%	0.17	72 / 901
heart	79%	42.68	682 / 861	0%	0	0 / 0
peripheral blood	78%	97.08	721 / 929	0%	0	0 / 0
stomach	74%	54.50	266 / 359	2%	0.08	7 / 286
ovary	72%	52.77	130 / 180	0%	0.00	1 / 430
skin	66%	39.69	1194 / 1809	1%	0.02	4 / 472
muscle	32%	11.66	258 / 803	0%	0	0 / 0
pancreas	16%	5.20	51 / 328	2%	0.05	3 / 178
liver	14%	4.41	32 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	3%	0.05	1 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1