CARNS1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
oligodendrocyte	16 studies	46% ± 17%	Explore
mesothelial cell	3 studies	31% ± 11%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	33% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	97%	1801.64	636 / 653	96%	29.58	579 / 605
brain	98%	10596.58	2587 / 2642	86%	44.19	609 / 705
muscle	95%	3944.37	764 / 803	0%	0	0 / 0
blood vessel	88%	1280.56	1174 / 1335	0%	0	0 / 0
stomach	70%	1457.17	251 / 359	11%	0.78	32 / 286
heart	79%	1157.84	676 / 861	0%	0	0 / 0
ovary	18%	144.28	32 / 180	58%	3.42	248 / 430
spleen	52%	377.02	126 / 241	0%	0	0 / 0
lymph node	0%	0	0 / 0	52%	3.52	15 / 29
pancreas	0%	1.88	1 / 328	43%	2.92	76 / 178
adipose	42%	1493.25	505 / 1204	0%	0	0 / 0
esophagus	12%	89.69	173 / 1445	16%	1.07	30 / 183
lung	8%	84.44	46 / 578	19%	0.97	221 / 1155
uterus	10%	78.46	17 / 170	14%	1.22	65 / 459
prostate	5%	48.02	12 / 245	16%	0.50	82 / 502
breast	7%	53.27	34 / 459	12%	0.48	136 / 1118
peripheral blood	17%	146.46	158 / 929	0%	0	0 / 0
intestine	7%	46.92	68 / 966	10%	0.71	52 / 527
liver	0%	2.50	1 / 226	12%	1.54	48 / 406
skin	1%	6.36	14 / 1809	7%	0.31	34 / 472
bladder	0%	0	0 / 21	6%	0.26	32 / 504
kidney	2%	16.84	2 / 89	3%	0.13	28 / 901
tonsil	0%	0	0 / 0	4%	0.18	2 / 45
adrenal gland	0%	0	0 / 258	2%	0.30	4 / 230
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1